LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele20g0288	ATGTGGCTACGTTTTGCTCCGATATTGTGGAATGTGTATTCCAAATTTCAAGTGTGGGTGAGGAGGAGGAAGGACGGAGGGGCATTATGGGAAATCGAAGGGGTTATCCCTACGAGAAAATGTTCTCCCGCCTTCACGCTTCTTGAATCCTCATCTCATCAGCAAAAGCGAAACCCCACAATTATAGAGACCGTAGAGAGAGGGGGGGGCAGAGGGAGAGTCAAAAGCAGAAGTGAAGAGGAATGTAGTGAGGCTACCCCTCTGGAAATGGACACACCGGAGAGGAACCAGATCGGCACTCCCCTCTCCAAATTTGAGGATTCACCCGTCTTCAACTTTATCAATAGTCTTTCTCCTATAAAGCCTCTTAAGTCTGTTCATAGTACTCAGACTATCAATTCACTCAGTTTTTCATCTCCTCCATCTGTGTTTACATCACCCCATGTCACCTGTCACAGGGAATCTAGATTTCTCAGGAGGCATAACGTTTTAGATGGATCAAAGCATAAGGTTTTGCCTGAAGATGGGAAAAAAATATGTTCAAGTAAAGAAGCTCTTGCAGATTCAGCTCATGCATATCATAACTCAAGTGAGCTACAAGGAAATGCTGATCAAGGGATTCCCCTGCAAGATTCAACAATTGAGCCATCTAATGAACACTCGGAGTTTCCAATTGAGCTACCACAAACCTTAAAATATGATTGTGGTAGCCCGGCTTGTGATCCTCCACCCGGAGGTGATGAGACAAATTCTTTTCTGGATTTGTCAAGTAAGGCAGCATCAGATGTTGCCTATTTTGATGAAGCCTGTAAAACAAATTCATCTGAGACTGAAGTTTTACTTCCAGGAATATGTCAAATTGAGCCAAGAATTGGAGCCTCAGAATGTGACTGGGATGGTTTACTTTCAGATGCTACTGATCTATTAATTTTCAACTCTCCAAACGAAAGAGAAACTTTAAAGGGTCTAATGCAGAAATCATTTGATCCCACGGGACGGTTTAGCAATTCTGTGTCTCAGTTGCCAAAAACTACCTTAATTCATGGAGAGAAAATGCGAATTGTTGATCCAGCTGCTTCTGGTTCAGAAGTTGAGACTGAAGGTCATCCTTCTCAACCAGGAGAAGACATTGACAATGATCAGGCACAGGACAATCTTGCTAACACTGCTGGGATGGGTGGCAATCCTAATAATACAATGGATAATCAGCTTATTTCAATAACACGCCATGGCATACGGAGGCGTTGTCTAGACTTTGAGATGGTTGGAGGAAGAAGGAAGAACTCCAATTATGGTTCGAATAACAGTAGTTCCAGCACATTACAATCTGATGAGAGGAATGTCGCTAATGATGAGCAACTGCTTCCTGCAAAACGCAATGGTAATTCACAGATGTGCATTTTGCCCGGAATTGGCTTACACTTGAATGCTCTTGCCACCATAAAAGATTACAAAATCTTAAAAGTTGAAAATATATCTTCTGGAAGACAAGTCAGTCTGCCTAGCCCTGCCTTGCAACAATCTTCAAGCCAAGAACATAGTCTAGCATTGGTGCCTTTATCAACAGAAGGAGATTCAGATCTGCCAGACAATGGGGTTCAGTCTGTGGAAGATTGTTCCCAGCCCTCAGGATATGTGGTTGATGAAGATTTCAACCAGAATAGCCCCAAAAAGAAAAGACGTAAGTTGGAGCCAGCTGGAGATGGTGAGTCTTGTAAGCGTTGTAATTGCAAGAAATCAAAGTGTTTGAAGCTTTATTGTGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAACCTTGCTCTTGCCAAGATTGCTTCAACAAGCCGATTCATGAGGATACAGTTCTTGCAACTCGCAAGCAGATCGAGTCTCGTAATCCTCTAGCCTTCGCTCCTAAAGTCATTCGAAGCTCTGATGCTGTACCTGAAATTGGTGATGATCCCAACAAAACTCCAGCTTCGGCTCGGCACAAAAGAGGATGTAACTGCAAGAAATCGAGCTGCTTAAAGAAATATTGCGAATGCTATCAGGGCGGTGTTGGTTGCTCCATCAGCTGTAGATGTGAAGGGTGTAAGAATGCGTTTGGTAGAAAGGATGGTTCCGTTCCTATTGGAATAGAAGCTGAACCAGAAGAAGAAACCGAATCATCTGAGAAGGCTGTAGCCGAAAAACCCTTGCAAAAATCTGAGATCCAGAACAATGTAGAACATCCAGAGTCTACTCTTCCTACGACACCATTACGTATTTGCAGACCATTGCTTCCTCTTTCATCATTTTCATCAAAGGGAAAACCACCAAGATCCTCTTTCATTACTACCATACCGGCTTCTGGATTTTATGCCAGCCAAAAACTCGGGAAACCCAGCATCCTTCGGTCTCAAGCCAAGTTTGAAAAGCAGTTTAAACCCGTTTCCAACGACGAAATGCCGGAGGTTCTCCGGGGTGATGGATCTCCAAGCATCAAGACATCATCTCCAAATGGCAAGAGGATCTCCTCTCCTAACTGCGACTTTGGATCATCGCCGAGTCGAAGAAGTGGCAGGAAGTTGATATTACAATCCATCCCATCATTTCCTTCTCTCACTGCTCCTCATATTTAG	2601	0.436	MWLRFAPILWNVYSKFQVWVRRRKDGGALWEIEGVIPTRKCSPAFTLLESSSHQQKRNPTIIETVERGGGRGRVKSRSEEECSEATPLEMDTPERNQIGTPLSKFEDSPVFNFINSLSPIKPLKSVHSTQTINSLSFSSPPSVFTSPHVTCHRESRFLRRHNVLDGSKHKVLPEDGKKICSSKEALADSAHAYHNSSELQGNADQGIPLQDSTIEPSNEHSEFPIELPQTLKYDCGSPACDPPPGGDETNSFLDLSSKAASDVAYFDEACKTNSSETEVLLPGICQIEPRIGASECDWDGLLSDATDLLIFNSPNERETLKGLMQKSFDPTGRFSNSVSQLPKTTLIHGEKMRIVDPAASGSEVETEGHPSQPGEDIDNDQAQDNLANTAGMGGNPNNTMDNQLISITRHGIRRRCLDFEMVGGRRKNSNYGSNNSSSSTLQSDERNVANDEQLLPAKRNGNSQMCILPGIGLHLNALATIKDYKILKVENISSGRQVSLPSPALQQSSSQEHSLALVPLSTEGDSDLPDNGVQSVEDCSQPSGYVVDEDFNQNSPKKKRRKLEPAGDGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLATRKQIESRNPLAFAPKVIRSSDAVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDGSVPIGIEAEPEEETESSEKAVAEKPLQKSEIQNNVEHPESTLPTTPLRICRPLLPLSSFSSKGKPPRSSFITTIPASGFYASQKLGKPSILRSQAKFEKQFKPVSNDEMPEVLRGDGSPSIKTSSPNGKRISSPNCDFGSSPSRRSGRKLILQSIPSFPSLTAPHI	866

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele20g0288	866	MobiDBLite	consensus disorder prediction	818	860	-	-
	Lele20g0288	866	ProSiteProfiles	CRC domain profile.	571	696	IPR005172	-
	Lele20g0288	866	MobiDBLite	consensus disorder prediction	552	569	-	-
	Lele20g0288	866	MobiDBLite	consensus disorder prediction	359	400	-	-
	Lele20g0288	866	SMART	CXC_2	570	611	IPR033467	-
	Lele20g0288	866	SMART	CXC_2	656	697	IPR033467	-
	Lele20g0288	866	MobiDBLite	consensus disorder prediction	521	569	-	-
	Lele20g0288	866	MobiDBLite	consensus disorder prediction	424	446	-	-
	Lele20g0288	866	MobiDBLite	consensus disorder prediction	68	84	-	-
	Lele20g0288	866	MobiDBLite	consensus disorder prediction	427	446	-	-
	Lele20g0288	866	Pfam	Tesmin/TSO1-like CXC domain, cysteine-rich domain	573	608	IPR005172	-
	Lele20g0288	866	Pfam	Tesmin/TSO1-like CXC domain, cysteine-rich domain	659	694	IPR005172	-
	Lele20g0288	866	MobiDBLite	consensus disorder prediction	67	96	-	-
	Lele20g0288	866	PANTHER	PROTEIN TESMIN/TSO1-LIKE CXC 2	90	862	IPR044522	GO:0003700
	Lele20g0288	866	MobiDBLite	consensus disorder prediction	376	400	-	-
	Lele20g0288	866	MobiDBLite	consensus disorder prediction	801	866	-	-
	Lele20g0288	866	MobiDBLite	consensus disorder prediction	707	746	-	-
	Lele20g0288	866	MobiDBLite	consensus disorder prediction	727	741	-	-
	Lele20g0288	866	MobiDBLite	consensus disorder prediction	527	550	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele20g0288	Lele-ChrLele20	10679855	10688330	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele20g0288	105	865	CPP Transcription Factor Family	AT4G14770	44.072	1.23e-162	487

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	CPP	Lele20g0288		TCR	2.2e-11	No_clan