Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0287 ATGTATTTACGGCCGCTCGCAGTCTTCGCACTCCCTGCTACCCCTCCAGCCATGGCCGTCGGGAAGAACAAGCGCATTTCCAAAGGGAAGAAAGGAGGAAAGAAGAAGGCAGCTGATCCATTTGCCAAGAAGGATTGGTATGATATCAAGGCTCCTTCTGTTTTCCAAACTAAAAGTGTGGGCAAAACCCTTGTCACTCGTACTCAGGGTACCAAGATTGCCTCAGAAGGACTGAAGCACAGAGTGTTTGAGGTCTCATTGGCTGATCTTCAAAATGATGAGGACCACGCGTACAGGAAGATTAGGTTGAGAGCTGAGGATGTTCAAGGGAAGAATGTTCTCACAAATTTCTGGGGAATGGACTTCACGACTGATAAGTTGAGGTCATTGGTTCGCAAATGGCAAACTTTGATTGAAGCTCATGTGGACGTGAAGACCACCGATAACTACACATTGAGGATGTTCTGCATTGGGTTCACCAAGAGGCGTTCCAACCAGGTTAAGAGGACCTGCTATGCCCAATCAAGCCAGATCAGACAGATCCGCAGGAAGATGAGGGAGATCATGACTAACCAGGCAACATCCTGCGATTTGAAAGAGTTGGTACGCAAGTTCATCCCCGAGATGATTGGAAAGGAGATTGAGAAGGCAACATCTAGTATCTATCCTTTGCAGAACGTGTTCATTCGCAAGGTCAAGATCTTGAAGGCTCCTAAGTTTGATCTCGGAAAACTAATGGAGGTTCATGGAGATTATTCAGAAGATGTTGGTGTGAAGGTAGACAGACCTGCGGATGAGACAATGGCCGAGGCTCCCACCGAAATCGTTGGAGCTTAA 837 0.4719 MYLRPLAVFALPATPPAMAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQTKSVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMTNQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADETMAEAPTEIVGA 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0287 278 Pfam Ribosomal S3Ae family 33 238 IPR001593 GO:0003735|GO:0005840|GO:0006412
Lele20g0287 278 PANTHER 40S RIBOSOMAL PROTEIN S3A 17 270 - -
Lele20g0287 278 Hamap 40S ribosomal protein S1 [RPS3A]. 18 275 IPR027500 GO:0003735|GO:0005840|GO:0006412
Lele20g0287 278 ProSitePatterns Ribosomal protein S3Ae signature. 78 90 IPR018281 GO:0003735|GO:0005840|GO:0006412
Lele20g0287 278 SMART Ribosomal_S3Ae_2 32 238 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0287 Lele-ChrLele20 10671392 10673559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0287 18 278 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 87.405 3.85e-167 461