Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0286 ATGGCCTCTCATCATCATCGTCATCGTTGGCTTCTTCCTTTACCATTCTCTGTTATCTTCTTCCTCATTTTTCTTCTCTCCATTGTCAAACCTTCTCACCAAGCTTCTTCTTCTTCTCCTTCTAATGTCACCGTCCCATTAAACCCTAGACTCATCAAAGCTTACTATGCTCTTCAAGCATGGAAGCATTCCATCACTTCTGATCCCAAGAACTTCACCTCCAACTGGTACGGCTACCATGTCTGCAACTACCACGGCGTTTACTGTACTCCGGCACCCGACGACCCCCACGTCTACACCGTCGCTGGCATCGACCTCAACCACGGCAACATCTCTGGTTCCTTGCCGGAAGACCTTGGTCTCCTCACCGACCTTGCTCTCTTCCACCTTAACTCCAACCGATTCTGTGGGACCCTCCCTCAGAGCTTCCGTAATCTTCATCTTCTCCATGAGCTTGACGTCAGTAACAACCAGCTCTCCGGTCCGTTCCCCGACGTCGTTTTGTGTCTCCGTTCTTTGAAGTTCTTGGACATTAGGTTCAACTCCTTCCATGGCAAGGTCCCTTCAGATCTCTTTGAACTCAAACTCGATGCCGTTTTCATCAACGACAACAAGTTTAAGTTCTCGTTGCCGGAGAACCTCGGGAAGTCTCCGGTATCGGTATTGGTCTTTGCCAATAATAATCTTAATGGGTGTATTCCGGCGAGCTTGGGGAAAATGAAGAGCACGCTTAATGAGATTATAATTTCGAACAGCGGGTTAAAGGGTTGTTTGCCGGAGGAGATTGGTAAATTGGATGAGGTTACGGTGTTTGATGTGAGTGGCAATAAGTTGGTCGGGACGTTGCCGGAATCTATTGAGGGGATGAAGAAGTTGGAGCAGTTGAATGTTGCGCATAACGAGCTCTCCGGTGAGATTCCGGCGAGTGTGTGCTCGTTGCCGAGGTTGCAGAACTTCACGTACTCTTATAATTACTTCTGCAGTGAACCGGCTACCTGTCTGAAGTTGCCGGAGGAAGATGATCGGAAAAATTGCATTCCGTACCGGCCGATGCAGAGGTCGGAAATGGAATGTAAAGCTTTTTATGCTCACCCAGTTGATTGTGGCGCCTTTGGATGCTCAAGGCGGCCGCCTCCTCCATCACCACCTCCGCCCCCTCCTCCTCCTCCTCCTCCACCACCACCACCACCACCACCTCCACCTCCTCCTCCTCCTCCGGCAGTTCACAATTATTATCCGTGA 1242 0.5008 MASHHHRHRWLLPLPFSVIFFLIFLLSIVKPSHQASSSSPSNVTVPLNPRLIKAYYALQAWKHSITSDPKNFTSNWYGYHVCNYHGVYCTPAPDDPHVYTVAGIDLNHGNISGSLPEDLGLLTDLALFHLNSNRFCGTLPQSFRNLHLLHELDVSNNQLSGPFPDVVLCLRSLKFLDIRFNSFHGKVPSDLFELKLDAVFINDNKFKFSLPENLGKSPVSVLVFANNNLNGCIPASLGKMKSTLNEIIISNSGLKGCLPEEIGKLDEVTVFDVSGNKLVGTLPESIEGMKKLEQLNVAHNELSGEIPASVCSLPRLQNFTYSYNYFCSEPATCLKLPEEDDRKNCIPYRPMQRSEMECKAFYAHPVDCGAFGCSRRPPPPSPPPPPPPPPPPPPPPPPPPPPPPPPAVHNYYP 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0286 413 Gene3D Ribonuclease Inhibitor 216 345 IPR032675 -
Lele20g0286 413 Pfam Leucine rich repeat N-terminal domain 56 89 IPR013210 -
Lele20g0286 413 Gene3D Ribonuclease Inhibitor 54 215 IPR032675 -
Lele20g0286 413 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 26 406 - -
Lele20g0286 413 MobiDBLite consensus disorder prediction 375 413 - -
Lele20g0286 413 MobiDBLite consensus disorder prediction 373 413 - -
Lele20g0286 413 SUPERFAMILY L domain-like 55 336 - -
Lele20g0286 413 FunFam Leucine-rich repeat extensin-like protein 1 55 216 - -
Lele20g0286 413 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 240 329 - -
Lele20g0286 413 Pfam Leucine rich repeat 125 182 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0286 Lele-ChrLele20 10659493 10660734 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0286 48 373 Leucine-rich Repeat extension Gene Families AT3G22800 68.196 3.79e-161 460