Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0284 ATGGCGACTGCCCCAGCTTCAGCTGGAGGAGAAATAATGTCTCTGAAAGATCAGGGCAACGAGTTTTTCAAGTCAGGAAAGTATCTCAAAGCCGCAGCAATTTATACACAAGCTATCAAGCAAGATCCTTCAAACCCTACTCTTTATAGTAACCGTGCTGCTGCATTGCTTCAACTGGATAAGCTTACAAAAGCTCTTGAGGATGCTGAGATGACAATAAAACTAAAGCCTGAATGGGAAAAGGGGCATTTTAGGAAAGGATGCGTACTTGAGGCCATGAAACTATATGATGATGCCTTAGCTGCCTTTCAGATGGCTTTGCAGTATAACCCCCAAAGTCAAGAAGTATCAAAAAAGATAAGGAAGATAAACCAACTAGCAAAAGATAGAGATCGAGCGCAAGAAGTGGAGAATAAAAGATCTAATGTTGACATGACTAATCATTTAAATACATTGAAACCTGAATTGTCTGCAAAGTATGGATCTAAAGAATGCTGGAAAGACTTGTTTTCTTTCCTTGTTGAGACCATGGAGACAGCTGTAAAGTCATGGCATGGAACTTCTGCAGTGGATCCTAGAGTCTACTTCCTTCTTGATAAAGAAAATACACAGACTGATAAATATGCCCCAGTTGTTAATATTGATAAGGCCTTTGAATCACCACATACGCATGGAAGCTGTTTTTCATTTCTCAGACAATATGCTGAGGACTCCTTTTCCAGAGCAGCTTGCATAGTGGTGCCCAAAAGCATAATTGCCTATCCGCAGGTCTGGAAAGGCCAAGGATCAAGGAGATGGAAACATGGGCAGAATGATGGTTTCTTTGTTCAATTTGAATCACCTTTACTAAGAAAGCTGTGGTTTATTCCCAGTTCCAATGAAATGGGGCAAACGTTATGCAGGGACCCAGAAGTCTTGGACATTGGTGCTCATGAAATTATTCCGCGTATATTCAAAGAAAAGCTGCCTAGTTCTTAG 978 0.409 MATAPASAGGEIMSLKDQGNEFFKSGKYLKAAAIYTQAIKQDPSNPTLYSNRAAALLQLDKLTKALEDAEMTIKLKPEWEKGHFRKGCVLEAMKLYDDALAAFQMALQYNPQSQEVSKKIRKINQLAKDRDRAQEVENKRSNVDMTNHLNTLKPELSAKYGSKECWKDLFSFLVETMETAVKSWHGTSAVDPRVYFLLDKENTQTDKYAPVVNIDKAFESPHTHGSCFSFLRQYAEDSFSRAACIVVPKSIIAYPQVWKGQGSRRWKHGQNDGFFVQFESPLLRKLWFIPSSNEMGQTLCRDPEVLDIGAHEIIPRIFKEKLPSS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0284 325 SMART tpr_5 12 45 IPR019734 GO:0005515
Lele20g0284 325 SMART tpr_5 46 79 IPR019734 GO:0005515
Lele20g0284 325 SMART tpr_5 80 113 IPR019734 GO:0005515
Lele20g0284 325 FunFam serine/threonine-protein phosphatase 5 11 125 - -
Lele20g0284 325 Gene3D Tetratricopeptide repeat domain 11 126 IPR011990 GO:0005515
Lele20g0284 325 SUPERFAMILY TPR-like 14 123 IPR011990 GO:0005515
Lele20g0284 325 Coils Coil 52 72 - -
Lele20g0284 325 ProSiteProfiles TPR repeat profile. 12 45 IPR019734 GO:0005515
Lele20g0284 325 Pfam TPR repeat 19 59 - -
Lele20g0284 325 PANTHER TPR REPEAT CONTAINING PROTEIN 7 320 IPR045248 -
Lele20g0284 325 ProSiteProfiles TPR repeat profile. 80 113 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0284 Lele-ChrLele20 10648171 10653213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0284 1 123 U-box Gene Family AT3G07370 30.894 1.26e-08 53.5