Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0282 ATGGATGTATGTGAGACCAAAGGTGACTGTAGAAGGAGAAGAAGCAACATCAACAACAACAACTACCCCCTAAATTACCATCCCACATGCTATTATTCCCCAAAGGAAGAAACCTACCGGGCCACCTCCCCAAGCCCGTCAACTTTGACCGACATGAGCCCACGGGCTTATAGTGGTCACTTTGAGGATTGCACATCCTTTGGCACGGCCCAAATCAGCCCACAGCTCTATTATTCGGCTCTGTCTCGCACCGAAGATCTCAAAAATCTTCCTTTCACCTTCCCAAAACCACCATCCTATGCAGAACCAGGCATTTCCTATGACTATCCTTTGTTTCCAAACTACATGGCCAACACGGAATCATCTCGAGCCAAGGCGAGGTCGCAGAGCGCGCCGAAGCAGCGGCCGCCTGAGACATTCGAGCGGCAACCAAGCCGACGACGGCCTTCAGTGGAAGGGAGGAACGTGCCTAGGCCCGCGAGGATGCAGAGGTCGTCGTCTCATGTGGGGTCCACGACCCATAACTACCAGTATCCTTGGTCAATGATCAGGCTTGATAAGTCCGCTGCTTCACTCAAGGGAAGTGAATGTGGATCTTCTAGTACTGTTCTCACAAATACTAACTACTGCAAGTCCCTTGTTGCTTATGATACCAGCAAATGGCTTCGAAGCATCTTGACCGGCAAGAAAGACAAAGACAAAGAAAAATGTTCAAAAACGACCACTGACATTATTCCTCAACAAGATCGAACCCCGCCGACCACTTCCACCACACCTCCCAAAGAGAAACGACGATGGAGTTTCCGACGATCCTCCGTCTCATCAACTACACCTTCAACCGCCACCACACCGACAACTCCTGCAGAATCAAACGCTGTCGCTTCTAACTCCTCACCGACATATATTGCTGACGTTGATAAGAAACACGCCATGGACGTCGCTGCTGCCACCACCACTGCCACAGAAGCAGCCCCCGCTGTCATTCGCTTGAGCGCCTCCAATGGCTCTGGTATAACCGATGAGGAAGCTGCGGCCATTAAAATTCAATCTGTTTTCCGGTCTTACCTGGCGAGAGCTCGAGCTCAGAGGATTCGAATGGTTTCATCGGAAGATCACAAGCATCATCAAATACAAGATAACGTGTTCCTGCAGATCTATGACGTGAGTTTTGTTCATTTCCTGCGTTTAAGGTCAAAGCATGATGATGATGATCTTTCTCAGGGAAGAATGAATTTGCAGAATTGCTCTGTTTCTCTTTGCTTACTCATATCAATCTGCAGAAGAAACTTTTCTAAGAAAAGATATATGTTTTCATTAGGAATAGATTAA 1329 0.4816 MDVCETKGDCRRRRSNINNNNYPLNYHPTCYYSPKEETYRATSPSPSTLTDMSPRAYSGHFEDCTSFGTAQISPQLYYSALSRTEDLKNLPFTFPKPPSYAEPGISYDYPLFPNYMANTESSRAKARSQSAPKQRPPETFERQPSRRRPSVEGRNVPRPARMQRSSSHVGSTTHNYQYPWSMIRLDKSAASLKGSECGSSSTVLTNTNYCKSLVAYDTSKWLRSILTGKKDKDKEKCSKTTTDIIPQQDRTPPTTSTTPPKEKRRWSFRRSSVSSTTPSTATTPTTPAESNAVASNSSPTYIADVDKKHAMDVAAATTTATEAAPAVIRLSASNGSGITDEEAAAIKIQSVFRSYLARARAQRIRMVSSEDHKHHQIQDNVFLQIYDVSFVHFLRLRSKHDDDDLSQGRMNLQNCSVSLCLLISICRRNFSKKRYMFSLGID 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0282 442 MobiDBLite consensus disorder prediction 230 296 - -
Lele20g0282 442 MobiDBLite consensus disorder prediction 120 136 - -
Lele20g0282 442 MobiDBLite consensus disorder prediction 241 261 - -
Lele20g0282 442 Pfam Protein of unknown function (DUF4005) 87 154 IPR025064 -
Lele20g0282 442 MobiDBLite consensus disorder prediction 139 154 - -
Lele20g0282 442 ProSiteProfiles IQ motif profile. 341 370 IPR000048 GO:0005515
Lele20g0282 442 Pfam IQ calmodulin-binding motif 343 360 IPR000048 GO:0005515
Lele20g0282 442 MobiDBLite consensus disorder prediction 270 296 - -
Lele20g0282 442 Gene3D - 313 375 - -
Lele20g0282 442 PANTHER IQ-DOMAIN 5-RELATED 221 361 - -
Lele20g0282 442 MobiDBLite consensus disorder prediction 120 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0282 Lele-ChrLele20 10640104 10643346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0282 199 358 IQD Protein Family AT4G14750 34.320 7.14e-12 65.1