Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0276 ATGAACGCCGCCACCGCCACCGCCACCTTCCGCTCCATTCTCGACAAACCCCTCAGTCAGCTCACCGAGGATGACATTTCCCAGCTCACCCGCGAAGATTGTCGCAGGTTCCTCAAAGAAAAAGGAATGCGTCGGCCTTCTTGGAATAAATCGCAGGCGATCCAGCAAGTTATTTCACTCAAAGCTTTGCTCGACCCAGCTGACGACGATTCCGGCACCGGGCCCGTACGGAGATTCCCTTTTGTTTCCGCTCAAGAAAATACCCCACCTGATAATCCAGATGTGACTGGTAGCGGCAGCGGCGGCGGCAGCGGCGGCGCTAATGTCGCCGGAGTTGAGGCGACATTGACTGGGCCGACTGAAGGGCCGGCTTTCCATGCTGCCGAAGAGCTTCCCAAGTCCGTGTCTTCTGTAGAGAAACCAACTAACGTTGAAACGAATGAGAAGGTCGTCAGTCCCAGAGAGAGTGCAACTAGTGGGCCTGTTGGGCAAATGACAATTTTCTATTGTGGTAAGGTGAATGTGTATGATGGGGTGCCACCTGATAAGGCACGGACAATCATGCAGCTTGCAGCAAGTCCCATCTATATACCTCAAGATGAACCATTCAAAAGAAGTACATCAGTCTGGCCTTGTCATTTACAGATGGATAAAGAGACCCTTGTCCCAATTGATGCCACAATCTCTCAGTTTGCTCAAGCAGGAGGTTCTAGATATGTAGATGGTAAGGTAAGCAGGGAAGTGTCATTGCAGCGATACTTAGAAAAGCGAAAGGACAGGAGAAGATTAAAGAGCAAGAAATTTACGGGAGTAACTTCTAACATGGAAATGTATTTCAGTCATCACGTGAAGGCCCACGCCTCAAATGGGAATTCAAGCCGCAGTAGCACAAGCTCTCCGCCACAGCCAAGGATGCCTCAAGCTTCTGGTGGCTCAGCTGATAACCAGTCAAGGATTGGCCTTCCTGTTGATCTCAATCACAAAGTGTGCTTAGTCATTTTCGTGATAATTGAACCCAACGCTAAGGAGCTGTTTGGTGAACTGTTAATGTTATCTCTCATTTCTTGGTATCTTATTCTTGGAAACCATGATATATATAATGTCCAAGAATCTGATAATGTGGCATTTAAGGCTCAAGTGTTTGTTATGACATACAGTGTGTTGAACGGTCCTAAGACAGTGTATGTGTCCCGCCATCGAAGAAGCTCGAGCTTCTCTCACAGCTTCTACCTTCTCTTTAGCTCTTTCAAAGTTCAAACTACTTCAATGGCTGCCTTCCCGCTCACTTCCTTCATTTCTTCACCATCTCCATGTCTCCTTCTTCGTCCTCGTTCCTCTGTTCCATCATTCAATCCCACCCATTTGCAGGCTTCAGTGATGCGAAATTGGAAGGTTGGAGCATTTTCTTTCAATGGCAGTGAGAGGAGAAATATGGTGACTGCAGCCGATCAAGATGGTCTGACAGATATTCTGAAAACTGACAATCCTTACAAAGCTAAGGAAGATGAAGATAAGGCAGAGTTTGAAGCTCTGTTGCAAAACGGTAGTTGTGTAAAAGAAGCATGGGCTCAATTTGCCAAGGGAGTCTCTGGTGAATGGGACGGATTCGGAGCAGACTTCTCTAACGTAGGGAAGGCTATTGAATTACCAGAGTTGGTAGTCCCTGAGGCATTCCGAGAGTGGGAGGTTAAGGTATTTGATTGGCAAACTCAGTGTCCCACTCTTGCTGAATCAGAGGAGAACATTCTTACATACAAGAACATTCTGTTGCTTCCTACTGTTGGTTGCGAGGCCGATGCGGCCACGAGATACAAGGTGGATGAAAGGCAAGTGGGAGGAGTAAATGGTGGGGCTATTGCCTTTGCTTATCAAACCAGTGGATGTTATGTTGCTGTCTGGCAGAAAGAGGATGAACTATTGGAGCTGGAATACTGCTTGATCAGTCCTCAAGACCCTGAGTCACGAGTGAGGATCATTCAGTTTGTCCGTGTGTCGGATAACACAAACATGGCGCTACAGAGAATCAAAGTATTTCGCGAGCAATGGTATGGACCATTTAGGAATGGTGAACAACTAGGAGGTTGCGCCATCCGTGATTCTGCATTCGCTTCTACTGCTCCCGTGACTGCTTCACTAGTTGCTGGTATTTGGCATGGGTCCAAAGCTGTTGCCACCATTGGCACTTCAAATACTGGGATCTTTCACGAGCTTTCGGGTGACAACATTCAGAACTGTGTCAGAGATGGATGCAGCGAGGTATTACTTCCTAAACAATTGTGGTGTTCATTTAAGCAAAACAAGGATGGTGAAGCTCTTAGTGAAGTGGGATGGCTTCTTGATCATGGACAGGCAATCAAATCAACCTGCCTGTTTTCAAGCACTGCAAAACCCAAGGAATTATCAATAGCATTAGAAACAAAGTGTTCGGAAGATGTATAG 2439 0.4686 MNAATATATFRSILDKPLSQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLDPADDDSGTGPVRRFPFVSAQENTPPDNPDVTGSGSGGGSGGANVAGVEATLTGPTEGPAFHAAEELPKSVSSVEKPTNVETNEKVVSPRESATSGPVGQMTIFYCGKVNVYDGVPPDKARTIMQLAASPIYIPQDEPFKRSTSVWPCHLQMDKETLVPIDATISQFAQAGGSRYVDGKVSREVSLQRYLEKRKDRRRLKSKKFTGVTSNMEMYFSHHVKAHASNGNSSRSSTSSPPQPRMPQASGGSADNQSRIGLPVDLNHKVCLVIFVIIEPNAKELFGELLMLSLISWYLILGNHDIYNVQESDNVAFKAQVFVMTYSVLNGPKTVYVSRHRRSSSFSHSFYLLFSSFKVQTTSMAAFPLTSFISSPSPCLLLRPRSSVPSFNPTHLQASVMRNWKVGAFSFNGSERRNMVTAADQDGLTDILKTDNPYKAKEDEDKAEFEALLQNGSCVKEAWAQFAKGVSGEWDGFGADFSNVGKAIELPELVVPEAFREWEVKVFDWQTQCPTLAESEENILTYKNILLLPTVGCEADAATRYKVDERQVGGVNGGAIAFAYQTSGCYVAVWQKEDELLELEYCLISPQDPESRVRIIQFVRVSDNTNMALQRIKVFREQWYGPFRNGEQLGGCAIRDSAFASTAPVTASLVAGIWHGSKAVATIGTSNTGIFHELSGDNIQNCVRDGCSEVLLPKQLWCSFKQNKDGEALSEVGWLLDHGQAIKSTCLFSSTAKPKELSIALETKCSEDV 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0276 812 MobiDBLite consensus disorder prediction 136 158 - -
Lele20g0276 812 MobiDBLite consensus disorder prediction 85 103 - -
Lele20g0276 812 MobiDBLite consensus disorder prediction 286 316 - -
Lele20g0276 812 Pfam tify domain 164 192 IPR010399 -
Lele20g0276 812 SMART tify_2 158 193 IPR010399 -
Lele20g0276 812 ProSiteProfiles Tify domain profile. 158 193 IPR010399 -
Lele20g0276 812 MobiDBLite consensus disorder prediction 66 158 - -
Lele20g0276 812 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 11 285 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0276 Lele-ChrLele20 10550668 10563774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0276 9 288 Tify Gene Family AT4G14720 46.309 5.09e-62 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele20g0276 tify 1.5e-15 No_clan