Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0267 ATGAAGCTTCTTCCGTCCGTGGAAACCGCCTCCGAGGCTTGCGTCTTCCCTGAGGAAACCCAAGAAGAGAAGCCACCGAGTTCTTCTGTGGTTGAAGGCAATGACCGTAGCCTTGATAATGGTGATGCGGTTGTCGATGTCTTCGGGAAAACCGTGGAGTTCCCGGTATTGGAGAACGCAGAAGACTCCGTTGAGGGCTTGTATTTTTATAAGAATGTTTACAATTTGATCCCCAAGTCTCTGGGAGGTTTTGCACGGTTGAAGACATTGAAGTTCTTCGGGAATGAGATTAATTTGTTTTCGCCGGAGTCTGGAAACTTGACGGGCTTGGAGTGTTTGCAGATGAAGATATCTTCTCCTGGGATTGGTGGGTTGCCATTGCATAAGTTGAAGGGTTTGAAGGAGTTAGAGTTGGCCAAAGTGCCTCCACGGCCTTCTGCTTTCCCTATATTGACCGAGATTTCAGGTCTTAAGTCCTTGACCAAGCTATCTATTTGCCACTTTTCTATAAGGTTGGTAATTCAATTTACCTATTTTCTCAATATTAATTTTCGCTTTCACTGGCGGCTGATGCATGTGCGCAATGCTTACGAAGTTGGATTACCAGGACGTGAAATGTATGGTAAATTGGACTCCATACTCTACCAATACCTTCCTCCTGAAATTGGCCTCTTAAAGGAACTGGAGTATCTTGATCTTTCGTTCAACAAGATGAAGACATTGCCATCCGAAATCAGTTATTTGAATTGCTTGATATCTTTGAAAGTTTCCAATAATAAGTTGGTGGAACTACCATCAACTATGGCCTTGTTGTCTGGGTTGGAGAACTTGGACCTGTCAAATAATAGGTTGACTTCATTGGGGCCTCTTGAACTTGGGTCTATGCATAAACTTCAGAATTTAAATCTTCAGGTACCGAATGGTGGACATGGGGGGACACCAGAAAGAAGGTGCCTCTGTGCATCCAAGTTCAATAAGCTGCACAACACACTTCAAATACCTTCATGGATCTGCTGTAATATGGAAGGAAATGACAAAGGTGAATGCAGTGATGATGTTAGCAGTTCTGTTGAAATGGATGTCTATGAAACTAGTTCACTGGAGAATGATGGACTACTTTCACATGCATCTCGTAATAGCTCATCAAACCTATTGACTAGCTCCTCGTCTAGCAGTAGATGTTTTGCAACCCGGAAATCAGGTAAAAGGTGGAAGCGGCGGCATTACTTACAGCAGAAAGCCCGTCAAGAGTGCTTAAACAACAGCAGGAAGTGGAAAGGTTTAAATAATTCCCAACTGAGCAAGGATATGCGTAGCATTTGTGAATCAGAAAACCAAGGCAATCTTGCTCTTGAAAACTGCAGTGAAGCTCATCCATCAGGCAGTGTGGGTTTGGATGATGAAGCTAAAAAGATGGTCTCAGAAGAAGCTGGGAAAGACAGTGTAATTGATGATGTTAACAATAATGAAGTGGATATTGAAAAGCAGTTTTCTAAGGATTGCTGTTCTAGTGAAAGTGAGGATGAAAAAGATGTTAACAATAAAGATGCTTCCTTATGCCCCTTGGAGAATGGACCTAGTGGGCAGGACAATGCATCAAGTACAGAATCTTTGAAGCATATTTCTAAATCAAAGAGACATTCAGAAAGGGATCTTGATAATCCTAAACCATGCAAGTCTAGAAAACCAATTGGTGATAGCTCATCATTGTCCTACAAGTATAGTAGATTATCATTTTGTGGCACCAAAGACCATCTGCCAGATGGCTTTTATGATGCTGGGCGTGATCGACCTTTTCTGCCCCTTGAGAGTTATGAGCAAAATCAGTGTCTTGCCTCTCGTGAAGTCATCTTATTGGACAGAGAAAGGGATGAAGAACTGGATGCCATCACAGTCTCTGCTCAGTCATTGGTGTTTCATTTGAAGCAGTTAAATGATTTTACCAAACATGGGAATCAAGCTGCTCTTGATAGCTTCCAGGTTGCTTCACTGCTTGCACTCTTTGTATCAGATCATTTTGGGGGCAGTGATAGAGGTGCTATTGTAGAACGGACACGAAAATCAGTGTCTGGTTCAAACTATCACAAGCCTTTTTTCTGTACATGCTCAACTGGAAGCAACAGTGATATTAGTGCTTCCTCTAAACCAGTTGTGAGCAGTGTAGAAGACATTACTCTTACTAATATCTGTGAAAAATCTCTCAAGTCTATAAAAAGAAGACGAAGTTCGATTATAGTTCCCATTGGATCTCTGCAGTTTGGTGTGTGTAGACATAGAGCTCTGCTTTTCAAGTATTTATGTGATCGCATGGAGCCTCCAGTACCTTGTGAGCTTGTTAGGGGTTTCTTGGATTTTTCGCCACATGCCTGGAACACCATTGTAGTTAACAGAGGTGACACTCAGGTTAGAATGTTGATTGATGCATGCCGGCCTCATGATATAAGAGAAGAGGAAGACCCTGAGTTCTTTTGCAGGCCTATGCAAAATGTGCACGCTCGCATGAAATTGAGCCTAAGGAGACTTCTAGGCTATGTTTGGTACATACCTCTTAGTCGAACCAAAGTTCCTATTTCCCCTGATGGAACTCCTGGTCCTGGTTGTTCATTTCCATCTCTCTCTACATGTGACAAATTTGAGAAGGCATCTTCAAGTACTTTAGTTCGGTGCAAATTTGGGTCAATTGAGGCTGCAGCAAAGACCTATCTTGATAAGTTATCAAAAGCTGGTGAAAAGCATGTTCCAGTAGAGCTGGCTTGTTATATTGCCAAAGATGTTGCGTGTGCATTGTCAGAGCTGCACTCGAAGCACATAATTCATCGCGATGTAAAAAGTGAAAACATTCTGATTGCTTTGGATAGAAAGAAAGATGATGGCACCCCTACTGTGAAGCTTTGTGATTTTGACAGTGCAGTGCCACTAAGATCACCTTTGCATAGCTGCTGTATTGCTCATGTGGGAGCACCTCCTCCTTATGTATGCACTGGAACACCACGATGGATGGCTCCCGAGGTTATGCGGACTATGTATAAAGAAAATACTTATGGATTGGAAGTTGATATCTGGTCATTTGGATGCTTACTTCTGGAGCTTCTCACACTGCGTATTCCATATTCTGGGCTATCCGATTTACAATTCCATGATATTTTACAGATGGGTAAACCCCCACAGTTAACCGAAGAAGTGGAGGCCCTGAGTTCCCCGAATGAACCCACTATGATTCGATCCAATGATGAGACGGAAAAATCAGATACCGAGGTCTCTTTTCAGGCTGCAACTGTTGAGAAGTCCATGTAG 3294 0.4262 MKLLPSVETASEACVFPEETQEEKPPSSSVVEGNDRSLDNGDAVVDVFGKTVEFPVLENAEDSVEGLYFYKNVYNLIPKSLGGFARLKTLKFFGNEINLFSPESGNLTGLECLQMKISSPGIGGLPLHKLKGLKELELAKVPPRPSAFPILTEISGLKSLTKLSICHFSIRLVIQFTYFLNINFRFHWRLMHVRNAYEVGLPGREMYGKLDSILYQYLPPEIGLLKELEYLDLSFNKMKTLPSEISYLNCLISLKVSNNKLVELPSTMALLSGLENLDLSNNRLTSLGPLELGSMHKLQNLNLQVPNGGHGGTPERRCLCASKFNKLHNTLQIPSWICCNMEGNDKGECSDDVSSSVEMDVYETSSLENDGLLSHASRNSSSNLLTSSSSSSRCFATRKSGKRWKRRHYLQQKARQECLNNSRKWKGLNNSQLSKDMRSICESENQGNLALENCSEAHPSGSVGLDDEAKKMVSEEAGKDSVIDDVNNNEVDIEKQFSKDCCSSESEDEKDVNNKDASLCPLENGPSGQDNASSTESLKHISKSKRHSERDLDNPKPCKSRKPIGDSSSLSYKYSRLSFCGTKDHLPDGFYDAGRDRPFLPLESYEQNQCLASREVILLDRERDEELDAITVSAQSLVFHLKQLNDFTKHGNQAALDSFQVASLLALFVSDHFGGSDRGAIVERTRKSVSGSNYHKPFFCTCSTGSNSDISASSKPVVSSVEDITLTNICEKSLKSIKRRRSSIIVPIGSLQFGVCRHRALLFKYLCDRMEPPVPCELVRGFLDFSPHAWNTIVVNRGDTQVRMLIDACRPHDIREEEDPEFFCRPMQNVHARMKLSLRRLLGYVWYIPLSRTKVPISPDGTPGPGCSFPSLSTCDKFEKASSSTLVRCKFGSIEAAAKTYLDKLSKAGEKHVPVELACYIAKDVACALSELHSKHIIHRDVKSENILIALDRKKDDGTPTVKLCDFDSAVPLRSPLHSCCIAHVGAPPPYVCTGTPRWMAPEVMRTMYKENTYGLEVDIWSFGCLLLELLTLRIPYSGLSDLQFHDILQMGKPPQLTEEVEALSSPNEPTMIRSNDETEKSDTEVSFQAATVEKSM 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0267 1097 MobiDBLite consensus disorder prediction 504 568 - -
Lele20g0267 1097 ProSitePatterns Serine/Threonine protein kinases active-site signature. 937 949 IPR008271 GO:0004672|GO:0006468
Lele20g0267 1097 MobiDBLite consensus disorder prediction 16 36 - -
Lele20g0267 1097 SMART LRR_typ_2 271 294 IPR003591 -
Lele20g0267 1097 SMART LRR_typ_2 225 248 IPR003591 -
Lele20g0267 1097 Gene3D Ribonuclease Inhibitor 24 184 IPR032675 -
Lele20g0267 1097 PRINTS Leucine-rich repeat signature 228 241 - -
Lele20g0267 1097 PRINTS Leucine-rich repeat signature 271 284 - -
Lele20g0267 1097 Pfam Protein kinase domain 902 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0267 1097 SUPERFAMILY Protein kinase-like (PK-like) 905 1056 IPR011009 -
Lele20g0267 1097 Gene3D Ribonuclease Inhibitor 187 351 IPR032675 -
Lele20g0267 1097 Pfam Ethylene-responsive protein kinase Le-CTR1 725 807 - -
Lele20g0267 1097 SUPERFAMILY RNI-like 68 304 - -
Lele20g0267 1097 SMART LRR_bac_2 271 290 - -
Lele20g0267 1097 SMART LRR_bac_2 225 244 - -
Lele20g0267 1097 SMART LRR_bac_2 248 267 - -
Lele20g0267 1097 FunFam Leucine-rich repeat protein kinase family protein 884 1094 - -
Lele20g0267 1097 SMART LRR_sd22_2 225 250 - -
Lele20g0267 1097 SMART LRR_sd22_2 271 292 - -
Lele20g0267 1097 MobiDBLite consensus disorder prediction 524 538 - -
Lele20g0267 1097 MobiDBLite consensus disorder prediction 1064 1097 - -
Lele20g0267 1097 Gene3D Transferase(Phosphotransferase) domain 1 894 1096 - -
Lele20g0267 1097 ProSiteProfiles Leucine-rich repeat profile. 227 248 IPR001611 GO:0005515
Lele20g0267 1097 ProSiteProfiles Leucine-rich repeat profile. 273 294 IPR001611 GO:0005515
Lele20g0267 1097 MobiDBLite consensus disorder prediction 539 560 - -
Lele20g0267 1097 ProSiteProfiles Protein kinase domain profile. 742 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0267 1097 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 110 828 - -
Lele20g0267 1097 SMART serkin_6 872 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0267 Lele-ChrLele20 10458874 10466567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0267 905 1044 MAP Kinase Kinase Kinase AT2G24360 34.286 4.77e-17 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Lele20g0267 Pkinase 2.8e-27 CL0016