Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0266 ATGAAAGACAGCTCGGAGCAGCATCTCGTGATCAAAACCCACTTGCAGAACTCCATAAATCCAGCGAAGAAAGCACCCAAAACGGTCCAAAATGGCAAAGGCCCACCACCTCAAGAACCTCACAACGCCAAACCCCATAGCCAGAGCCAACCTCCGCCTCCGGCAAAGAACAGAGGAAGAAGAAGGAGCCGGGGAGGCCGAAAGTCCGATCAAGGCGATGTTCCGATGCGACCCGCTTGTCGACCTTGCACTGTGGCTAATAAACCGCTATCAGAAAACACGGGTCAGATTCTGATATCAAGTACTGTAAACGGGCGGGTTGAAAATGGTGGTAACAACTCCTGTGATGTTGGGATGGGGTTTCCTACCTCAAGTAAATCTTTGAGCTTCGCTCCTAGGCCTGGATACGGACAAGTTGGGACAAAATGCATAGTGAAGGCTAACCATTTCTTTGCAGAGTTACCGGACAAGGACTTGAATCAATATGATGTCACTATTACCCCAGAAGTGTCGTCTAGAACAGTAAACAGGGCCATCATGGCGGAACTCGTGAGGCTGTACAAGGAGTGTGACTTGGGGATGAGACTCCCTGCATATGATGGCAGAAAAGGTCTGTACACAGCAGGGGAGCTTCCCTTTGCTTGGAGAGAGTTTAAAATTAAGCTTGTTGATGAAGACGATGGAGTTAATGGTCCCAAAAGGGAAAGAGAATACAAAGTGGTGATTAAGTTTGTTGCTCGGGCAAACGTGCATCACTTGGGTCAGTTTCTAGCTGGTAAGCGTGCTGATGCTCCACAAGAGGCACTTCAGATTCTTGACATTGTCCTAAGAGAGCTATCAACTAAGAGGTTTTGCCCCATTGGGAGGTCCTTCTTTTCACCTGATATTAGAAGACCTCAAAGGCTTGGAGAGGGATTGGAATCATGGTGTGGATTTTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCCTCGGCTGCGTTTATTGAGCCTCTTCCTGTTGTGGAATTTGTTGGTCAGCTGTTAGGAAAAGATGTGTTGTCAAGGCCATTGTCTGATGCTGATCGTGTAAAGGTATATATCTTCAGGTTTCCTGTTGATGACAACTCAACTATGAAATCAGTAGTTGAGTACTTCCAAGAGATGTATGGTTTCACTATTCAATATACTCACCTACCTTGCCTTCAAGTAGGAAACCAAAAGAAGGCAAACTATTTGCCTATGGAGGCATGCAAAATTGTCGAGGGGCAAAGGTATACAAAAAGGCTGAATGAGAAGCAAATTACTGCTTTGCTGAAAGTTACATGTCAGAGGCCCCGTGAACGGGAAAATGACATTTTGCGGACCATTCAACATAATGCTTATGATCAAGATCCTTATGCAAAGGAGTTTGGGATTAAGATCAATGAAAAATTAGCTTCTGTTGAAGCACGAATTCTTCCTGCCCCATGGTTGAAATATCATGACACTGGGAAAGAAAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATCAATGGGATGACTGTTAGCCGGTGGGCATGCATAAATTTTTCACGAAGTGTGCAAGATAGTGTTGTCCGCAGTTTTTGTAGCGAACTTGCTCAGATGTGTCAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCAATATATAATACCAAGCCTGAGCAGGTGGAGAAAGCTTTAAAGCATGTTTATCATGTTTCAATGAACAAAACCAAGGGGAAGGAATTAGAGCTTCTATTAGCAATATTACCTGACAACAATGGCTCTCTTTATGGTGATCTCAAGCGAATTTGTGAAACTGACCTTGGTTTAATTTCTCAATGTTGTCTGACGAAGCATGTCTTTAAGATCACCAAACAGTATCTGGCTAATGTGTCTCTGAAGATCAATGTTAAGATGGGAGGCAGAAACACTGTTCTTCTTGACGCTATAAGCTGCAGAATACCATTGGTTAGTGACATTCCGACCATAATATTTGGAGCAGATGTTACACACCCTGAAAATGGAGAAGATTCCAGTCCCTCAATAGCAGCTGTAGTAGCTTCCCAAGACTGGCCTGAAGTGACTAAATATGCCGGTTTAGTGTGTGCTCAAGCTCACAGACAGGAACTCATTCAAGATTTGTACAAAACTTGGCATGATCCTGTTCGTGGCACAGTCAGCGGTGGCATGATCCGAGACTTGTTGGTCTCCTTTAGAAAGGCAACGGGACAGAAGCCACTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGGCAATTTTATCAAGTTCTACTTTATGAGTTGGATGCAATCAGGAAGGCTTGTGCTTCCTTAGAGCCAAACTATCAGCCTCCAGTAACTTTTATTGTTGTACAAAAAAGACATCACACTAGGTTGTTTGCAAACAACCACAGGGACAAGAGCAGCACAGATAAGAGTGGGAATATATTGCCTGGAACCGTTGTTGATTCTAAAATCTGCCATCCAACAGAATTTGATTTTTATCTCTGCAGTCATGCGGGTATTCAGGGGACAAGTCGGCCAGCTCATTATCATGTGCTGTGGGATGAAAACAACTTCACAGCAGATGGAATTCAGTCTTTGACAAACAATCTATGTTACACATATGCTAGGTGTACGCGTTCTGTATCCGTTGTTCCTCCAGCATATTATGCACATCTAGCGGCATTTCGGGCCCGTTTCTATATGGAGCCTGACATGCAGGAGAACAGCTCTATTGGCGGTGGTAGCATTGGTCATGGTTCCAAAGCAACGCGAGCAGCTGGAGAATGTGGGGTCCGGCCATTGCCAGCCTTGAAAGAAAACGTGAAGAGGGTGCTAACCCTAGGCAGTCTTCCGGCCATCAGGCATGGAGATGGTGTTTAA 2922 0.4449 MKDSSEQHLVIKTHLQNSINPAKKAPKTVQNGKGPPPQEPHNAKPHSQSQPPPPAKNRGRRRSRGGRKSDQGDVPMRPACRPCTVANKPLSENTGQILISSTVNGRVENGGNNSCDVGMGFPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRAIMAELVRLYKECDLGMRLPAYDGRKGLYTAGELPFAWREFKIKLVDEDDGVNGPKREREYKVVIKFVARANVHHLGQFLAGKRADAPQEALQILDIVLRELSTKRFCPIGRSFFSPDIRRPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRVKVYIFRFPVDDNSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRERENDILRTIQHNAYDQDPYAKEFGIKINEKLASVEARILPAPWLKYHDTGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQDSVVRSFCSELAQMCQVSGMEFNPEPVIPIYNTKPEQVEKALKHVYHVSMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDKSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENSSIGGGSIGHGSKATRAAGECGVRPLPALKENVKRVLTLGSLPAIRHGDGV 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0266 973 CDD Piwi_ago-like 465 915 IPR045246 -
Lele20g0266 973 MobiDBLite consensus disorder prediction 10 25 - -
Lele20g0266 973 SUPERFAMILY PAZ domain 144 459 IPR036085 GO:0005515
Lele20g0266 973 ProSiteProfiles Piwi domain profile. 595 916 IPR003165 GO:0003676
Lele20g0266 973 Gene3D - 485 658 - -
Lele20g0266 973 MobiDBLite consensus disorder prediction 1 87 - -
Lele20g0266 973 SMART Piwi_a_2 595 916 IPR003165 GO:0003676
Lele20g0266 973 Gene3D - 664 959 IPR036397 GO:0003676
Lele20g0266 973 Gene3D paz domain 357 424 - -
Lele20g0266 973 Pfam Piwi domain 596 915 IPR003165 GO:0003676
Lele20g0266 973 ProSiteProfiles PAZ domain profile. 370 421 IPR003100 GO:0005515
Lele20g0266 973 Pfam Argonaute linker 2 domain 447 493 IPR032472 -
Lele20g0266 973 Pfam Argonaute linker 1 domain 286 335 IPR014811 -
Lele20g0266 973 Pfam Mid domain of argonaute 504 581 IPR032473 -
Lele20g0266 973 FunFam protein argonaute 10-like 664 961 - -
Lele20g0266 973 FunFam Argonaute 10 485 658 - -
Lele20g0266 973 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 122 917 - -
Lele20g0266 973 SMART DUF1785_2 285 337 IPR014811 -
Lele20g0266 973 CDD PAZ_argonaute_like 337 420 - -
Lele20g0266 973 MobiDBLite consensus disorder prediction 38 52 - -
Lele20g0266 973 Pfam PAZ domain 370 437 IPR003100 GO:0005515
Lele20g0266 973 SUPERFAMILY Ribonuclease H-like 585 917 IPR012337 -
Lele20g0266 973 Pfam N-terminal domain of argonaute 142 276 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0266 Lele-ChrLele20 10424067 10431975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0266 1 959 Eukaryotic Initiation Factors Gene Family AT5G43810 78.278 0.0 1569