Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0264 ATGTCTATGCCCTTCGTCACCAATTTGGAGCGAATACAGAAACTTTTGAATGCACCTCACAATCTTAGCAAACCAAACAAAAAATGGCATTCTGCATTTTTTAGCATATATTGTTACAGAGCTCTCTTGTCTCACTTCAAATCCACTTTGCTTCCCACCCCCACCATCAACAACACGTCTAAGTTATCTCCTTCTTCCTCCTTCAATGTCATCTATTTAAACCCAGATCATTCCTTCAGCGTTACTCAAACCACCCTCACCCATCTCGTTAAGGACAAAGATGTCGAAGCACTCCAGACACTTGGTGGGGTCCACGGCGTTGCCTCTGCTCTGAAAACAGACGTGGATCATGGAGTCAAAGGCGGTGATGATGATGATGATGATGATGATCCCCATGACGTCATGCGACGGCGCGACGCGTTTGGTTCTAACACCTACCCGAAACCACCAACGAGAGGGTTCTTTCATTTTGTGATTGAAGGCTTCAAGGACCCCACCATTCTCATTCTATTGGTCTGTGCTGCTCTGTCTCTTGGCTTCGGCATCAAGGAGAATGGAATCAACGAAGGCTGGTACGAAGGTGGAAGCATCTTCGTTGCAGTTTTTCTCGTCATTGCTGTATCTTCCATCAGCAACTTCAGACAGAGTAGACAATTCGAGAAGCTGTCACAGGTTAGCAACAACATCCAAGTGGATGTTGTACGAAGTGGTCGTCGGCAACAAGTTTCGATATACGACATCGTCGCAGGTGATGTTGTTTTGCTGAAGATTGGAGACCAAGTTCCTGCTGATGGCTTGTTCTTGGAAGGCCATTCTCTGCAAGTTGATGAGTCCAGCATGACAGGTGAGAGCGACCACGTAGAGATTAATGGCGACAAGAACCCATTTTTGTTTTCTGGGACAAAGGTGGCTGATGGGTTTGCCAAAATGCTCGTTACTTCCGTTGGCACGAACACGACATGGGGTCAAATGATGGGTTCCATAAGCAGAGACAACAATGAAGAAACCCCATTGCAAGAACGCCTCAATAAGCTTACTTCTGCGATAGGCAAGGTTGGTTTGGCTGTGGCTTTTCTTGTTCTTGTTGTTATGTTAGTTCGCTACTTCACAGGGAACACAACCGATGAGAATGGGAACAAAGAGTTCAAAGGAAGCAGAACCAAGTTTAATGATATAATGAACGGAGTTGTGAGAATTGTTGCCGCTGCTGTAACTATTGTGGTGGTTGCTATACCAGAAGGGCTTCCTTTGGCTGTGACTTTGACACTTGCTTACTCCATGAAGAAGATGATGGCTGATATGGCAATGGTGAGGAAGCTCTCTGCTTGCGAGACTATGGGCTCTGCTACAACCATTTGTACAGATAAGACGGGGACACTCACGCTTAATCAGATGAAAGTGAATAAGTTCTGGCTTGGACAAGAACCTATGGAAGAGAAACCTCTTGAATCTTCAGTTCATTCAGGTGTTCTTCAATTGATCAAAGAAGGGGTTGCGCTTAACACTACAGGTAGTGTTTACAAGTCTAATAAATCAACTTCTTCTGAATATGAGCTTTCAGGTAGTCCAACAGAGAAGGCCATTCTTTCGTGGGCTGTTCTTGATTTGAACATGAACATGGAGGAATTGACGCAAAGTTGTACCATCCTTCATGTCGAAGCCTTCAATTCCAAGAAGAAGAGAAGTGGGGTTTTGATTAAAAGCAAAGCAGACAACAGAATCCATGCACATTGGAAAGGTGCGGCCGAGATGGTACTGAGATTGTGTTCAAAGTACTATGATGCTTCTGGCAACCTGAAAGATCTTGACAGTGACAAAAGGATGGTGTTTGAGCAAATCATACAAGGGATGGCGGCCAGCAGCCTTAGGTGTATTGCTTTTGCGCATACAGAAGTAGCTGAAGAAGATGAAGAAGGAACCCAAAAGGTAAAAGAAGAAGGGCTCGCCCTCTTAGGTCTTGTGGGTATTAAGGATCCATGTCGTCCAGGTGTGAAGAAAGCTGTAAAAGATTGCCAACAATCAGGAGTAAATGTCAAGATGATCACAGGAGACAATGTTTTCACAGCCAAAGCCATAGCCACAGAATGCGGCATCCTCCAGCCTAATCAAGACGCAACAGAAGCAGTCATTGAAGGAGAAGTATTTCGAAACTTGTCTCCCGTGGAAAGGCTAAAGAGAGTGGAGAAAATTTCTGTGATGGCGCGATCCTCCCCATTTGACAAACTCCTTATGGTTCAATGCCTCAAACAGAAAGGTCATGTAGTTGCAGTCACAGGAGATGGCACAAATGATGCACCGGCGCTAAAAGAAGCTGATATAGGACTTTCCATGGGGATTCAAGGCACTGAGGTTGCAAAGGAAAGCTCGGATATAGTTATCTTGGATGATAATTTCGCTTCAGTTGCCACCGTTCTAAAGTGGGGAAGATGTGTCTATAGCAACATTCAAAAGTTCATTCAGTTTCAACTGACTGTAAATGTTGCTGCTCTGGTAATTAACTTTGTGGCTGCAGTATCAGCAGGAGAAGTGCCATTAACAGCAGTTCAACTATTGTGGGTGAACCTCATAATGGACACTTTGGGTGCTTTGGCTCTAGCAACAGAAAAGCCTACGATGGAGTTATTGGATAAACCGCCAGTGGGTAGAACTGAGCCACTCATCACCAACATCATGTGGAGAAATCTCTTAGCCCAAGCTTTATACCAGATCACAATTCTTCTGACATTACAGTTCAAGGGTGAAGATATATTTGGGGTGAGTTCAGAGGTAAATGACACTTTGATTTTCAACACATTTGTGTTATGCCAAGTGTTTAATGAGTTCAATGCAAGGAAGCTGGAGAAGAAGAATGTGTTCAAGGGGATTCACCAGAACAAGTTGTTTATGGGGATCATAGGGATAACCATAGTGCTTCAGGTGTTGATGGTGGAGTTTCTGAAGAAATTTGCAGACACGGAGAGGTTGAATTGGGGGCAGTGGGGTGTTTGCGTTTTAATGGCGGCTATTTCTTGGCCTCTTGGTTGGCTTGTCAAGTTCATTCCGGTCCCAACAAAACCATTGCTCACTTTCTTGAGCTTGAAAATGAAAGGAATACGTGGTTGGAGATGGTTATGA 3114 0.4438 MSMPFVTNLERIQKLLNAPHNLSKPNKKWHSAFFSIYCYRALLSHFKSTLLPTPTINNTSKLSPSSSFNVIYLNPDHSFSVTQTTLTHLVKDKDVEALQTLGGVHGVASALKTDVDHGVKGGDDDDDDDDPHDVMRRRDAFGSNTYPKPPTRGFFHFVIEGFKDPTILILLVCAALSLGFGIKENGINEGWYEGGSIFVAVFLVIAVSSISNFRQSRQFEKLSQVSNNIQVDVVRSGRRQQVSIYDIVAGDVVLLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINGDKNPFLFSGTKVADGFAKMLVTSVGTNTTWGQMMGSISRDNNEETPLQERLNKLTSAIGKVGLAVAFLVLVVMLVRYFTGNTTDENGNKEFKGSRTKFNDIMNGVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNQMKVNKFWLGQEPMEEKPLESSVHSGVLQLIKEGVALNTTGSVYKSNKSTSSEYELSGSPTEKAILSWAVLDLNMNMEELTQSCTILHVEAFNSKKKRSGVLIKSKADNRIHAHWKGAAEMVLRLCSKYYDASGNLKDLDSDKRMVFEQIIQGMAASSLRCIAFAHTEVAEEDEEGTQKVKEEGLALLGLVGIKDPCRPGVKKAVKDCQQSGVNVKMITGDNVFTAKAIATECGILQPNQDATEAVIEGEVFRNLSPVERLKRVEKISVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYSNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELLDKPPVGRTEPLITNIMWRNLLAQALYQITILLTLQFKGEDIFGVSSEVNDTLIFNTFVLCQVFNEFNARKLEKKNVFKGIHQNKLFMGIIGITIVLQVLMVEFLKKFADTERLNWGQWGVCVLMAAISWPLGWLVKFIPVPTKPLLTFLSLKMKGIRGWRWL 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0264 1037 SFLD C1.7: P-type atpase like 435 811 - -
Lele20g0264 1037 SUPERFAMILY HAD-like 451 863 IPR036412 -
Lele20g0264 1037 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 81 1015 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele20g0264 1037 Pfam Cation transporting ATPase, C-terminus 843 1013 IPR006068 -
Lele20g0264 1037 Gene3D - 160 1012 - -
Lele20g0264 1037 SFLD p-type atpase 435 811 IPR044492 -
Lele20g0264 1037 Gene3D - 132 329 - -
Lele20g0264 1037 SUPERFAMILY Calcium ATPase, transduction domain A 228 327 IPR008250 -
Lele20g0264 1037 Pfam E1-E2 ATPase 230 431 - -
Lele20g0264 1037 PRINTS P-type cation-transporting ATPase superfamily signature 782 794 - -
Lele20g0264 1037 PRINTS P-type cation-transporting ATPase superfamily signature 674 684 - -
Lele20g0264 1037 PRINTS P-type cation-transporting ATPase superfamily signature 276 290 - -
Lele20g0264 1037 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Lele20g0264 1037 PRINTS P-type cation-transporting ATPase superfamily signature 652 663 - -
Lele20g0264 1037 PRINTS P-type cation-transporting ATPase superfamily signature 758 777 - -
Lele20g0264 1037 FunFam Calcium-transporting ATPase 463 659 - -
Lele20g0264 1037 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Lele20g0264 1037 SMART Cation_ATPase_N_a_2 97 182 IPR004014 -
Lele20g0264 1037 Pfam haloacid dehalogenase-like hydrolase 450 772 - -
Lele20g0264 1037 Pfam Cation transporter/ATPase, N-terminus 102 177 IPR004014 -
Lele20g0264 1037 Gene3D - 463 659 IPR023299 GO:0000166
Lele20g0264 1037 PANTHER CATION TRANSPORTING ATPASE 67 1015 - -
Lele20g0264 1037 Gene3D - 450 803 IPR023214 -
Lele20g0264 1037 FunFam Calcium-transporting ATPase 775 1017 - -
Lele20g0264 1037 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 394 494 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0264 1037 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 197 370 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0264 1037 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 729 839 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0264 1037 FunFam Calcium-transporting ATPase 201 329 - -
Lele20g0264 1037 SUPERFAMILY Calcium ATPase, transmembrane domain M 102 1015 IPR023298 -
Lele20g0264 1037 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 664 IPR023299 GO:0000166
Lele20g0264 1037 FunFam Calcium-transporting ATPase 654 803 - -
Lele20g0264 1037 PRINTS H+-transporting ATPase (proton pump) signature 790 815 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0264 1037 PRINTS H+-transporting ATPase (proton pump) signature 758 774 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0264 1037 PRINTS H+-transporting ATPase (proton pump) signature 610 628 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0264 1037 MobiDBLite consensus disorder prediction 115 142 - -
Lele20g0264 1037 CDD P-type_ATPase_Ca_PMCA-like 136 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0264 Lele-ChrLele20 10392367 10395480 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0264 12 1029 Primary Pumps ATPases AT3G22910 67.188 0.0 1308