Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0263 ATGTCTATGGCGTTTGTGACCAGTTTGGAGACAATACAGAAACTTCTGATTGCCCCGAAGAATCTTAGCAAACCCAACAAAAAATGGCATTCTGCATTTGTTAGTATATATTGTTACAGAGCTCTCTTGTCTCACTTCAAATCCACTTTGCTTCTCACCAACACCACCACCACCATCACCAAGAAGAACTGGTCCAAGTTCTCTCCTTCTTCCTCCTTCACTGTTATCGATTTAAACACAGATCATTCCTTCAGCGTTACTCAAACCACCCTCACCCATCTCGTTAAGGACAAAGATGTAGAAGCACTCCAGAGTCTTGGTGGGGTCCACGGCGTGGCCTCTGCTCTGAAAACCGACGTGGATCATGGAGTCAAAGGCGGTGATGATGGTGATGATCCCCATCACGTCATGCGACGGCGCGACGCGTTTGGTTCTAACACCTACCCAAAACCACCTACTAGAGGGTTCTTTCATTTTGTGATTGAAGGCTTCAAGGACCCCACCATTCTCATTCTATTGGTCTGTGCTGCTCTGTCTCTTGGCTTCGGCATCAAGGAGAATGGAATCAACGAAGGCTGGTACGAAGGTGGAAGCATCTTCGTTGCAGTTTTTCTCGTCATTGCTGTATCCTCCATCAGCAACTTCAGACAGAGTAGACAATTCGAGAAGCTGTCCCAGGTTAGCAACAACATCCAAGTGGATGTTGTACGAAGTGGTCGTCGGCAACAAGTTTCGATATACGACATCGTCGCGGGTGATGTTGTTTTGCTGAAGATTGGAGACCAAGTTCCTGCTGATGGCTTGTTCTTGGAAGGCCATTCTCTGCAAGTTGATGAGTCCAGCATGACAGGTGAGAGCGACCACGTAGAGATTAATGGCGACCAGAACCCATTTTTGTTTTCTGGGACAAAGGTGGCTGATGGGTTTGCCAAAATGCTCGTTACTTCCGTTGGCACGAACACGGCATGGGGTCAAATGATGGGTTCCATTAGCAGAGACAACAATGAAGAAACCCCATTGCAAGAACGCCTCAATAAGCTTACTTCTGCGATAGGCAAGGTTGGTTTGGCCGTGGCTTTTCTTGTTCTTGTTGTTATGTTAGTTCGCTACTTCACAGGGAACACAACCGATGAGAATGGGAACAAAGAGTTCAACGGAAGCAGAACCAAGTTTAATGACATAATGAACGGAGTTGTGAGAATTGTTGCCGCTGCTGTAACTATTGTTGTGGTTGCGATACCAGAAGGGCTTCCTTTGGCTGTGACTTTGACACTTGCTTATTCCATGAAGAAGATGATGGCTGATATGGCAATGGTGAGGAAGCTCTCTGCTTGCGAGACTATGGGCTCTGCTACAACCATTTGTACAGATAAGACGGGGACACTCACGCTTAATCAGATGAAAGTGACGAAGTTCTGGCTTGGACAAGAACCTATGGAAGAGAAACCTCTTGAATCTTCAGTTCATTCAGGTGTTCTTCAATTGATCAAAGAAGGGGTTGCGCTTAACACTACAGGTAGTGTTTACAAGTCTAATAAATCAACAACTTCTGAATATGAGCTTTCAGGTAGTCCAACAGAGAAGGCCATTCTTTCGTGGGCTGTTCTTGATTTGAACATGAACATGGAGGAATTGACGCAAAGTTGTGCCATCCTCCATGTCGAAGCCTTCAATTCCAAGAAGAAGAGAAGTGGGGTTTTGATTAAAAGCAAAGCAGACAACAGAATCCATGCACATTGGAAAGGTGCGGCCGAGATGGTACTGAGATTGTGTTCAAAGTACTATGATGCTTCTGGCAACCTGAAAGATCTTGACAGTGACAAAATGAAGGTGTTTGAGCAAATCATACAAGGAATGGCGGCCAGCAGCCTTAGGTGTATTGCTTTTGCACATACAGAAGTAGCTGAAGAAAATGAAGAAGGAACCCAAAAGGTAAAAGAAGAAGGGCTCACCCTCTTAGGTCTTGTGGGTATTAAGGATCCATGTCGTCCAGGTGTCAAGAAATCTGTAAAAAATTGCCAACAAGCAGGAGTAAATGTCAAGATGATCACAGGAGACAATGTTTTCACAGCCAAAGCCATAGCCACAGAATGCGGCATCCTCCAGCCTAATCAAGACGCAACAGAAGCAGTCATTGAAGGAGAAGTATTTCGAAACTTGTCTCCAGAGGAAAGACTAAAGAGAGTGGAGAAAATTTCTGTGATGGCGCGATCCTCCCCATTTGACAAGCTCCTTATGGTTCAATGCCTCAAACAGAAAGGTCATGTAGTTGCAGTCACAGGAGATGGCACAAATGATGCACCGGCGCTAAAAGAAGCTGATATAGGACTTTCCATGGGGATTCAAGGAACTGAGGTTGCAAAGGAAAGCTCGGATATAGTTATCTTGGATGATAATTTCGCCTCAGTTGCCACCGTTCTAAAGTGGGGAAGATGTGTCTATAGCAACATTCAAAAGTTCATTCAGTTTCAACTGACTGTAAATGTTGCTGCTCTGGTAATTAACTTTGTGGCTGCGGTATCAGCAGGAGAAGTGCCATTAACAGCAGTTCAACTATTGTGGGTGAACCTCATAATGGACACTTTGGGTGCTTTGGCTCTAGCAACAGAAAAGCCTACAATGGAGTTATTGGATAAACCGCCAGTGGGTAGAACTGAGCCACTCATCACCAACATCATGTGGAGAAATCTCTTAGCCCAAGCTTTATATCAGATCACAATTCTTCTGACATTACAGTTCAAGGGTGAAGATATATTTGGGGTGAGTTCAGAGGTAAATGACACTTTGATTTTCAACACATTTGTGTTATGCCAAGTGTTTAATGAGTTCAATGCAAGGAAGCTGGAGAAGAAGAATGTGTTTAAGGGGATTCACAAGAACAAGTTGTTTATGGGGATCATAGGGATAACCATAGTGCTTCAGGTGTTGATGGTGGAGTTTCTGAAGAAATTTGCAGACACCGAGAGGTTGAATTGGGGGCAGTGGGGTGTTTGCGTTTTAATGGCGGCTATTTCTTGGCCTATTGGCTGGCTTGTCAAGTTCATTCCGGTCCCAACAAAACCATTGCTCAGTTTCTTGAGCTTGAAGAAGCACTGA 3096 0.4464 MSMAFVTSLETIQKLLIAPKNLSKPNKKWHSAFVSIYCYRALLSHFKSTLLLTNTTTTITKKNWSKFSPSSSFTVIDLNTDHSFSVTQTTLTHLVKDKDVEALQSLGGVHGVASALKTDVDHGVKGGDDGDDPHHVMRRRDAFGSNTYPKPPTRGFFHFVIEGFKDPTILILLVCAALSLGFGIKENGINEGWYEGGSIFVAVFLVIAVSSISNFRQSRQFEKLSQVSNNIQVDVVRSGRRQQVSIYDIVAGDVVLLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINGDQNPFLFSGTKVADGFAKMLVTSVGTNTAWGQMMGSISRDNNEETPLQERLNKLTSAIGKVGLAVAFLVLVVMLVRYFTGNTTDENGNKEFNGSRTKFNDIMNGVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGQEPMEEKPLESSVHSGVLQLIKEGVALNTTGSVYKSNKSTTSEYELSGSPTEKAILSWAVLDLNMNMEELTQSCAILHVEAFNSKKKRSGVLIKSKADNRIHAHWKGAAEMVLRLCSKYYDASGNLKDLDSDKMKVFEQIIQGMAASSLRCIAFAHTEVAEENEEGTQKVKEEGLTLLGLVGIKDPCRPGVKKSVKNCQQAGVNVKMITGDNVFTAKAIATECGILQPNQDATEAVIEGEVFRNLSPEERLKRVEKISVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYSNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELLDKPPVGRTEPLITNIMWRNLLAQALYQITILLTLQFKGEDIFGVSSEVNDTLIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKLFMGIIGITIVLQVLMVEFLKKFADTERLNWGQWGVCVLMAAISWPIGWLVKFIPVPTKPLLSFLSLKKH 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0263 1031 FunFam Calcium-transporting ATPase 777 1019 - -
Lele20g0263 1031 Pfam Cation transporter/ATPase, N-terminus 106 179 IPR004014 -
Lele20g0263 1031 ProSitePatterns E1-E2 ATPases phosphorylation site. 457 463 IPR018303 -
Lele20g0263 1031 SFLD C1.7: P-type atpase like 437 813 - -
Lele20g0263 1031 FunFam Calcium-transporting ATPase 655 805 - -
Lele20g0263 1031 Gene3D - 162 1015 - -
Lele20g0263 1031 PRINTS H+-transporting ATPase (proton pump) signature 612 630 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0263 1031 PRINTS H+-transporting ATPase (proton pump) signature 792 817 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0263 1031 PRINTS H+-transporting ATPase (proton pump) signature 760 776 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0263 1031 Pfam Cation transporting ATPase, C-terminus 845 1015 IPR006068 -
Lele20g0263 1031 Pfam haloacid dehalogenase-like hydrolase 452 774 - -
Lele20g0263 1031 Pfam E1-E2 ATPase 232 433 - -
Lele20g0263 1031 FunFam Calcium-transporting ATPase 465 661 - -
Lele20g0263 1031 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 82 1017 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele20g0263 1031 SFLD p-type atpase 437 813 IPR044492 -
Lele20g0263 1031 SMART Cation_ATPase_N_a_2 102 184 IPR004014 -
Lele20g0263 1031 PANTHER CATION TRANSPORTING ATPASE 72 1017 - -
Lele20g0263 1031 SUPERFAMILY Calcium ATPase, transmembrane domain M 107 1017 IPR023298 -
Lele20g0263 1031 CDD P-type_ATPase_Ca_PMCA-like 138 893 - -
Lele20g0263 1031 SUPERFAMILY HAD-like 453 865 IPR036412 -
Lele20g0263 1031 Gene3D - 132 331 - -
Lele20g0263 1031 PRINTS P-type cation-transporting ATPase superfamily signature 278 292 - -
Lele20g0263 1031 PRINTS P-type cation-transporting ATPase superfamily signature 654 665 - -
Lele20g0263 1031 PRINTS P-type cation-transporting ATPase superfamily signature 455 469 - -
Lele20g0263 1031 PRINTS P-type cation-transporting ATPase superfamily signature 676 686 - -
Lele20g0263 1031 PRINTS P-type cation-transporting ATPase superfamily signature 784 796 - -
Lele20g0263 1031 PRINTS P-type cation-transporting ATPase superfamily signature 760 779 - -
Lele20g0263 1031 SUPERFAMILY Calcium ATPase, transduction domain A 230 329 IPR008250 -
Lele20g0263 1031 FunFam Calcium-transporting ATPase 203 331 - -
Lele20g0263 1031 Gene3D - 452 805 IPR023214 -
Lele20g0263 1031 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 461 666 IPR023299 GO:0000166
Lele20g0263 1031 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 396 495 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0263 1031 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 199 372 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0263 1031 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 731 841 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0263 1031 Gene3D - 465 661 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0263 Lele-ChrLele20 10379248 10382343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0263 12 1031 Primary Pumps ATPases AT3G22910 68.324 0.0 1326