Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0255 ATGACTGTTTGTGACTTTGATGATTCATATATAAATCCTTTCGCATTTTTCAATTTTGCCTTGATATTAGTGTATTGAAGTCCATCCTCAGAGAAGCAAGAACGCCTCAATAAGCTGTCCCAGGTGAGCAACCACATCCAAGTGGATGTTGTACGAAGTGGTCACCGGCAACAAGTTTCGATATACGACATCGTCGCTGGTGATGTTGTTTTGCTGAAGCTTGGAGACCAAGTTCCTGCTGATGGCTTGTTCTTGGAAGGCCATTCTCTGCAAGTTGATGAGTCCAGCATGACAGGTGAGAGCGACCGCGTAGAGATTAATGGCGACAATAACCCATTTTTGCTTTCTGGGACAAAGGTGGCTGATGGGTTTGCCAAAATGCTCGTTACTTCCGTTGGCATGAACACGACATGGGGTCAAATGATGGGTTCCATAAGCAGAGACAACAATGAAGAAACCGCATTGCAAGAACTCCTCAATAAGCTTACTTCTGCGATAGGCAAGGTTGGTTTAGCTGTGGCTTTTCGTGTTCTTGCTGTTATGTTAGTTCGCTACTTCACAGGGAACATAACGGACGAGAATGGGAATAAAGCAGAACTAAGTTTTTGTGAGAATTGTTGA 621 0.4396 MTVCDFDDSYINPFAFFNFALILVYXSPSSEKQERLNKLSQVSNHIQVDVVRSGHRQQVSIYDIVAGDVVLLKLGDQVPADGLFLEGHSLQVDESSMTGESDRVEINGDNNPFLLSGTKVADGFAKMLVTSVGMNTTWGQMMGSISRDNNEETALQELLNKLTSAIGKVGLAVAFRVLAVMLVRYFTGNITDENGNKAELSFCENC 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0255 206 Pfam E1-E2 ATPase 47 184 - -
Lele20g0255 206 FunFam Calcium-transporting ATPase 30 146 - -
Lele20g0255 206 PANTHER CATION TRANSPORTING ATPASE 20 198 - -
Lele20g0255 206 Gene3D - 24 146 - -
Lele20g0255 206 SUPERFAMILY Calcium ATPase, transduction domain A 47 144 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0255 Lele-ChrLele20 10293471 10296239 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0255 31 197 Primary Pumps ATPases AT3G22910 65.868 6.54e-64 211