Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0239 ATGCCAAAGGAAAATCGCTATATAAACCCAACGCTCCACACACAAACATTTTGTCCCGTGACACTCTGTGGGTTGCTCCTTCCTTTTCGCCCTCTCCTCTCGTCAACCCACTCAGCCATGGAACCAGGCGCCCCTCAGCCGCCGCCAGCGACGCCGACACTCCCGTCACCTCCGGCCTCACCCTCTCCCTCCTCGGCCGTCACCATCCTCGGAAAGTACCAGTTGATCCGTCTCCTAGGTCGTGGCAGCTTCGCCAAGGTTTACCAGGCTCGATCCTTAATCGATGGCTCCATCGTCGCGGTGAAGATCATCGACAAGGCGAAAACCGATGCCGCCATGGAGCCTCGGATTGTTCGTGAGGTTGATGCAATGCGACGGCTTCATGACCATCCGCATGTTCTGAAAATCCATGAGGTTTTGGCTACAAAGACGAAGATCTACCTGATAGTGGAGTTTGCTGCCGGCGGGGAGTTATTCTCGAAGATCTCTCGTAAAGGCCGATTGACTGAGCCGGTGGCGCGTCGTTACTTTCAGCAATTGGTTTCCGCCCTCTGTTTCTGCCACAAAAACGGTGTCGCACACCGTGATTTGAAGCCTCAGAATCTTCTTTTGGACCACGAAGGGAATCTGAAGGTCTCTGATTTCGGACTGTCCGCCTTACCGGAACAGCTTAAAAACGGTTTGCTCCACACTGCTTGTGGCACCCCGGCTTATACCGCGCCGGAGATCCTCTTCCGGCGCGGATACGACGGCTCGAAAGCCGACGCGTGGTCGTGCGGGCTTATACTCTACGTACTGCTCGCCGGCTACCTCCCTTTCTCCGACGCCAACATCCCTGAGATGTGCAAGAAGATCAGCCGGCGCGATTACCAGTTCCCGGAGTGGATATCCAAACCGGCCCGGTTCGTGATTAACCGACTACTCGAACCGAACCCGAAGAATCGGATGAGTCTAGAGTTACTCTATCAAAACTCGTGGTTCAAGAAATCGCTAAAGCCCCAACCCGACGAGAGCTTATTCGAGTCGGGTCCCACGGCGAAATCGTATCAGAAGCTGGAAAGAATGGGTTCAGGCGTGAACGCTTTCGACATAATCTCCATGTCGTCAGGTTTGGACCTAACGGGGTTGTTTGAAACAACGTCGGATAACAGGAGAGAAAAGAGATTCACAACGAGTGCTTCACTGAATGTAGTGGAAGAGAAAGTGAAGGAAGTAGGAGGAATTTTAGGATTCAAAGTTGAGATAGGTAAGAACGGAGCTATTGGATTTGGTAAAGGAAAAGTAATTCTTGTGGTGGAGGTGTTTGAGATAGTTCCTGAGTTGTTAATGGTGACGGTGAAAGTGATAAATGGTGGGTTTGAATTTGATGAGCTTCACTGGGGAGGCTGGAAATCTGGGCTTCAAGATGTTGTTCTTTCATGGCACAATGAATCACTGTGA 1440 0.5167 MPKENRYINPTLHTQTFCPVTLCGLLLPFRPLLSSTHSAMEPGAPQPPPATPTLPSPPASPSPSSAVTILGKYQLIRLLGRGSFAKVYQARSLIDGSIVAVKIIDKAKTDAAMEPRIVREVDAMRRLHDHPHVLKIHEVLATKTKIYLIVEFAAGGELFSKISRKGRLTEPVARRYFQQLVSALCFCHKNGVAHRDLKPQNLLLDHEGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILFRRGYDGSKADAWSCGLILYVLLAGYLPFSDANIPEMCKKISRRDYQFPEWISKPARFVINRLLEPNPKNRMSLELLYQNSWFKKSLKPQPDESLFESGPTAKSYQKLERMGSGVNAFDIISMSSGLDLTGLFETTSDNRREKRFTTSASLNVVEEKVKEVGGILGFKVEIGKNGAIGFGKGKVILVVEVFEIVPELLMVTVKVINGGFEFDELHWGGWKSGLQDVVLSWHNESL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0239 479 FunFam Non-specific serine/threonine protein kinase 355 472 - -
Lele20g0239 479 Gene3D Transferase(Phosphotransferase) domain 1 158 346 - -
Lele20g0239 479 Gene3D Kinase associated domain 1, KA1 356 472 - -
Lele20g0239 479 SMART serkin_6 73 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0239 479 SUPERFAMILY Protein kinase-like (PK-like) 69 335 IPR011009 -
Lele20g0239 479 FunFam Non-specific serine/threonine protein kinase 64 355 - -
Lele20g0239 479 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 68 447 - -
Lele20g0239 479 Gene3D Phosphorylase Kinase; domain 1 76 157 - -
Lele20g0239 479 MobiDBLite consensus disorder prediction 42 62 - -
Lele20g0239 479 ProSiteProfiles NAF domain profile. 354 378 IPR018451 GO:0007165
Lele20g0239 479 CDD CIPK_C 360 468 - -
Lele20g0239 479 ProSiteProfiles Protein kinase domain profile. 73 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0239 479 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Lele20g0239 479 CDD STKc_AMPK-like 72 326 - -
Lele20g0239 479 Pfam Protein kinase domain 73 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0239 479 Pfam NAF domain 359 414 IPR004041 GO:0007165
Lele20g0239 479 FunFam Non-specific serine/threonine protein kinase 66 157 - -
Lele20g0239 479 MobiDBLite consensus disorder prediction 37 65 - -
Lele20g0239 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0239 Lele-ChrLele20 10069365 10070804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0239 54 476 CBL-interacting serine-threonine protein kinases AT4G14580 58.469 2.11e-164 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele20g0239 Pkinase 7.8e-68 CL0016