Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0236 ATGAGAAACTCCAAACCCCACCGCGTTTCTCTTCTCTTCTTATTCTTCTTCTTCCTCCTTCATCTTCTTCATCCTGCACAAGCTCAGAACAAGATTGAACCCAACACCACCGGCTACAAGTGCTCCGCCAACCAGACCGCCGGCTCCGGCTACGGTTACCCTTGCAGGACCTACGCCTTCTACCAAGCTTCGGCTCCTTTCCTCGACCTCGCCTCCATTGGCGATCTCTTCTCTGTTAGTCGCCCCATGATTGCAGATCCGAGCAACATTTCTACTCCTAATTCAACTTTAGCGCCAAATCAACCCCTCTTCGTTCCCTTATCTTGCTCCTGCAACTCCATCAACTCAACCATAGGAGCCATCTCTTACGCCAATCTGTCCTACACCATCAAGAAAGGAGACACTTTCTACGGACTCTCCACGTTTAGCTACAGGAACCTCACGACCTACCAATCCGTAGAAGTCGTGAACCCTACCCTCATCCCGACGAATTTGACGATCGGTGTTAACGCCGTGTTCCCAGTGTTCTGCAAGTGCCCTAACACCACGCAAGTGCGAAGCGGAGAGAGCATCCTGATTTCTTATGTGTTTCAACCGAATGATACAATACCGTCGATTGCCACCCGTTTTGGATCGAAATCGCAGTCAATAATTGATGCTAACCTTAAAGGTTTCCGAGAATTTGATACTATCTTTGTCCCGGTGTCGCGATTGCCGGAGCTGACACAGATTCAGGTTAACACTTCGGCGCCGCCGGCTTCCTCCCCTGCTGCAACATCTGTAACTTCCGGCGACAGAACAGGAACAGTGAGAGGATTGGCGATTGGGTTGGGGATTGTGGGGTTACTGTTGATTCTGGTTTTGGGGCTGTGGGTTTACAGAGAGGCTCTGTTCAAGGACAGAGTGGCTATGGTGGTCAGAGATGAAGAGAAGCAGAAGCAGAGCTTTGTGAAGGAGACGAAGGGATCGAAGGAAGCGGAGGCGAAATTGATGGCGAATGTGTCGGATTGTTTGGATAAGTATAGGGTTTTTGGGTATGAAGAACTGAGAGAAGCCACAAATGGGTTTGATCAGAGCAGCTTGATTCTTGGGTCTGTGTATAAAGGAACCATTGATGGAGAAGTCTATGCTATCAAGAAGATGAAGTGGAACGCTTACGAGGAGCTCAAGATCTTACAGAAGGTGAACCATGGGAATTTGGTGAAGTTAGAGGGCTTTTGCATTGACGACGACGAAGCAAACTGTTATCTAGTCTATGAATATGTTGAAAACGGATCCCTCTACTCATGGCTGCATGAAGACCGGACTGAAAGGTTGAACTGGAAGATGAGGCTACGCGTCGCCATTGATGTAGCCAATGGCATGCAATATATCCACGAGCACACAAGACCAAGGGTTGTGCACAAAGACATCAAGAGTAGCAACATCCTCTTAGACACCACCATGAGAGCCAAGATAGCTAATTTCGGACTTGCAAAGTCCGGAATGAATGCTATCACAATGCACATCGTGGGGACTCAGGGTTACATAGCTCCAGAATATCTGGCCGATGGCGTAGTCTCAACCAAGATGGATGTGTTCGCCTTTGGGGTAGTTCTGCTCGAACTAATCACAGGCAAAGAAGTCATTGACGAAAGAGGGAATACCTTGTGGACAAGCGTCGTAAAAGCCTTTGAAGTGGGCAGTGAGCAAGAGAAGAGCAAGAGACTGAGGGAGTGGTTGGATAGTTCTCTTTTGAGAGAGACATGTTCAATGGAGAGTCTCATGGGTGTGCTTAATATTGCCCTTGCTTGCTTGCATAAGAATCCAACGAAGAGGCCAAGTATGGTGGAGATTGTTTATGCTTTGAGTAAAAGTGAAGATTCAGGTTTTGATACCTCAGATGATACCATAGGTTCTCCATTGGTATCCGCAAGGTGA 1920 0.4786 MRNSKPHRVSLLFLFFFFLLHLLHPAQAQNKIEPNTTGYKCSANQTAGSGYGYPCRTYAFYQASAPFLDLASIGDLFSVSRPMIADPSNISTPNSTLAPNQPLFVPLSCSCNSINSTIGAISYANLSYTIKKGDTFYGLSTFSYRNLTTYQSVEVVNPTLIPTNLTIGVNAVFPVFCKCPNTTQVRSGESILISYVFQPNDTIPSIATRFGSKSQSIIDANLKGFREFDTIFVPVSRLPELTQIQVNTSAPPASSPAATSVTSGDRTGTVRGLAIGLGIVGLLLILVLGLWVYREALFKDRVAMVVRDEEKQKQSFVKETKGSKEAEAKLMANVSDCLDKYRVFGYEELREATNGFDQSSLILGSVYKGTIDGEVYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDDDEANCYLVYEYVENGSLYSWLHEDRTERLNWKMRLRVAIDVANGMQYIHEHTRPRVVHKDIKSSNILLDTTMRAKIANFGLAKSGMNAITMHIVGTQGYIAPEYLADGVVSTKMDVFAFGVVLLELITGKEVIDERGNTLWTSVVKAFEVGSEQEKSKRLREWLDSSLLRETCSMESLMGVLNIALACLHKNPTKRPSMVEIVYALSKSEDSGFDTSDDTIGSPLVSAR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0236 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Lele20g0236 639 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 12 619 - -
Lele20g0236 639 Pfam Protein kinase domain 364 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0236 639 FunFam PTI1-like tyrosine-protein kinase 3 422 629 - -
Lele20g0236 639 Pfam LysM domain 195 227 IPR018392 -
Lele20g0236 639 SUPERFAMILY Protein kinase-like (PK-like) 339 616 IPR011009 -
Lele20g0236 639 ProSiteProfiles Protein kinase domain profile. 338 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0236 639 Gene3D Transferase(Phosphotransferase) domain 1 422 631 - -
Lele20g0236 639 SMART serkin_6 356 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0236 639 Gene3D Phosphorylase Kinase; domain 1 325 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0236 Lele-ChrLele20 10024923 10028317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0236 14 618 Receptor kinase-like Gene Family AT2G23770 33.651 1.35e-87 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele20g0236 Pkinase 1.9e-42 CL0016