Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0230 ATGACAAGTTTGAATCTGAAGGAGACGGAGCTGTGCCTAGGATTGCCCGGCGGCGGTGGCGGTGGCAGTGAGCCGATGGAAACCACCGTCACTCCAAAGGCCTCAGGGAACAAGAGATCCTTCTCTGCAACTGTTGATCTCAAGCTCAACCTCGCCGATGATTCCAAGGATGATGCCGCCTGCGAAGAAGAAGATCTCACCAATCAGGTCCACCACAAAAAGAATATCGCCTCCTCAAAGAAGGACACAACTAAGTCACTTGCTAAGGCACAAGTGGTAGGTTGGCCTCCAGTGAGGTCATACAGGAAGAACGTGATGTCAAATAATAATAAGGTGAGTAGTGAAGAGGGGAATACTGAGAAGAAGATGGTGGCGAAGGCTCCAGTGACCGGATCAGGATCATTAGTGAAGGTGTGTATGGATGGTGCACCCTACCTTAGGAAGGTGGACTTGAAAATGTACAAAAGCTACCAACAACTTTCTGATGCCTTGGCCAAAATGTTCAGCTCCTTCACCATGGGGAAGTATGAGGGGGCCCAAGGAATGATAGATTTCATGAATGAGAGCAAGTTGATGGATCTGCTGAACAGCTCTGAGTATGTGCCAGCCTATGAAGATAAGGATGGTGATTGGATGCTCGTTGGCGATGTCCCATGGGAGATGTTCGTTGATTCATGCAAGCGTCTGCGAATAATGAAAGGATCAGAAGCCATTGGATTGGCCCCAAGAGCCATGGAAAAATGCAAAAGCATCAGAAGCTGA 762 0.4856 MTSLNLKETELCLGLPGGGGGGSEPMETTVTPKASGNKRSFSATVDLKLNLADDSKDDAACEEEDLTNQVHHKKNIASSKKDTTKSLAKAQVVGWPPVRSYRKNVMSNNNKVSSEEGNTEKKMVAKAPVTGSGSLVKVCMDGAPYLRKVDLKMYKSYQQLSDALAKMFSSFTMGKYEGAQGMIDFMNESKLMDLLNSSEYVPAYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSIRS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0230 253 Pfam AUX/IAA family 8 243 IPR033389 -
Lele20g0230 253 FunFam Auxin-responsive protein 129 244 - -
Lele20g0230 253 Gene3D - 129 246 - -
Lele20g0230 253 MobiDBLite consensus disorder prediction 11 37 - -
Lele20g0230 253 ProSiteProfiles PB1 domain profile. 133 234 IPR000270 GO:0005515
Lele20g0230 253 SUPERFAMILY CAD & PB1 domains 130 233 - -
Lele20g0230 253 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 239 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0230 Lele-ChrLele20 9918873 9921507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0230 130 242 B3 DNA Binding Superfamily AT4G23980 30.973 2.47e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele20g0230 AUX_IAA 3.4e-84 CL0072