Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0213 ATGTTTGATTTCAGAACCTCACACATGTTTCTTGTCCCAATGCTTGCGTTTGTCTCCTTTAACGTTTCATGCTTCACTGGAGGACCGTGCAGGTTATTTCTGGTTTTTGAGGTAAACTTGGAAGACATGTTGGTTCTGATTTTGATTTCAGGATATGTTATTGTTGTGAACTTCCCTATCATTGAAGGTTTGGTCTCGAGAAAAGATAAGGGACGTGTTCCTCTTTCTGTTAACAATCCAGAAATTAAGGTCACATCAGAAACTTCAATGGAAGAAGACAGTACTGGTCATCGTCACCGTCATCATCAAGAAGAAGATGCAGAAGAATATGGCTCTAAAGGCACATCCTCAACTAAACGTTCTTATTATGGCTGCTCATTCTGCAAAGAAGGCTTCACAAATGCACAGGCATTAGGAGGCCACATGAACATTCACAGAAAGCACAGACTAATCAAGAAGAAAACCAAGCAAGAACAATTCGTGATGCCGTTCATGACGGCGGCTAAATCTTCCATGAGCAAAGAGTTCAATAACGCCGATGAGTTTCTCAGGTATGGCAGTTCCATTTTCCAGAATATAAACCCTAAGTGGTCTCAGTCCTTGAATAAGCAGGAGTTTGATCTGAATCTCCAAATCGGTTCAGCTCGTGATGAGGATGTTAATGGCGAAAGATCAATGAATCTGGAAGAAGACGGTGAAGAAGTGGACTTAGAGCTCAGACCTGGTCACCATCCATCATAA 741 0.417 MFDFRTSHMFLVPMLAFVSFNVSCFTGGPCRLFLVFEVNLEDMLVLILISGYVIVVNFPIIEGLVSRKDKGRVPLSVNNPEIKVTSETSMEEDSTGHRHRHHQEEDAEEYGSKGTSSTKRSYYGCSFCKEGFTNAQALGGHMNIHRKHRLIKKKTKQEQFVMPFMTAAKSSMSKEFNNADEFLRYGSSIFQNINPKWSQSLNKQEFDLNLQIGSARDEDVNGERSMNLEEDGEEVDLELRPGHHPS 246
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0213 246 PANTHER OS07G0101800 PROTEIN 97 244 - -
Lele20g0213 246 Gene3D Classic Zinc Finger 98 181 - -
Lele20g0213 246 ProSiteProfiles Zinc finger C2H2 type domain profile. 123 150 IPR013087 -
Lele20g0213 246 SUPERFAMILY beta-beta-alpha zinc fingers 119 150 IPR036236 -
Lele20g0213 246 MobiDBLite consensus disorder prediction 217 246 - -
Lele20g0213 246 ProSitePatterns Zinc finger C2H2 type domain signature. 125 145 IPR013087 -
Lele20g0213 246 MobiDBLite consensus disorder prediction 86 113 - -
Lele20g0213 246 MobiDBLite consensus disorder prediction 81 116 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele20g0213 Lele-ChrLele20 9625962 9628638 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0213 123 242 C2H2 Transcription Factor Family AT5G43540 38.211 1.10e-15 70.1