Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0212 ATGTTTAAAGCATTAGCATCTGGACTGTCAATCTTGTTCCTCTTCAAATGTGTATCTGCAACAGAAAATGAATTTCCCAGATGTAACTGTGATGATGAGGCAAGCTTGTGGACTATTGAGAGTATTCTGGAGTGCCAGAGAGTCAGTGATTTGTTGATTGCTGTTGCCTACTTCTCCATACCCATTGAGCTGCTTTGTTTTATCAGTTGTGCGAATGTCCCATTCAAATGGGTTCTTGTTCAGTTCATTGCCTTCATTGTACTATGTGGATTGACACATTTGCTGAATGCATGGACTTATGGTCCTCACTCTTTCCAACTGATGGTGGCCCTTACGGTATTCAAAACTCTTACGGCTTTGGTATCATGTGCCACTGCTATTACTCTCATGACTCTCATTCCTTTACTTCTTAAAGTGAAGGTCAGAGAATTAATGCTGAGGAAAAAGACCTCTGAACTTGGACGAGAAGTCGGTATTATTATGAGGCAGAAGGAAGCTGCAAAACATGTAAGGATGCTCACTCGAGAGATCCGCAAGTCACTTGATAGGCATAATATTTTGTACACCACCTTGGTGGAGCTGTCTGAAACACTTGGTTTGCAAAATTGCGCAGTCTGGATGCCTAATTTCGATAAAACAGAGATGAACCTCACTCATGAATTGAATAGGAGGAATCTTAATTCTTCTATACTCATTACAGATCCAGATGTTGTGAGAATTAAGGCAACTGATGGAGTAAATATTCTTAGCCCTGTCTCTGCACTTGCTGTTGCTAGTAGTGGAAATGCTTCTGAGGTAGGACCAGTGGCTGCAATTCGGATGCCGATGCTTCGGATTTGTAATTTCAAAGGTGGAACACCTGAGGTAAGGCAGGCATGTTATGCAATATTGGTTCTGATTCTTCCTGGTGGAGAGCCAAGATCTTGGAGTAATCAGGAGCTGGAAATAGTTAAAACGGTTGCTGATCAGGTTGCGGTAGCTCTCTCTCATGCTGCAATTCTTGAAGAGTCCCAACACATGAGAGAGAAGTTGGAGGAGCAAAATCGAATTCTACAACAGGCACAAAGGAATGCTTTGATGGCGAGTCAGGCAAGGAACTTATCTCAGAAGGTCATGAGCGATGGAATGAGAAGACCAATGCACTCAATTTTGGGTTTGCTTTCAATCATACAAGATGAGAATTTGAAAAGCGAACAGAAACTCATTGTGGATTCGATGCTGAGAACCAGTAATGTCCTATCAAATTGGATAAATGATGCCATGAATATTTCAGCCAAGGATGATGGGGGATTTCAATTGGAGATGAGATCTTTTGGGTTACATGCCATGATAAAAGAAGCAGCATGCCTTGCCAAGTGTCTTTGCGTTTATAGGGGCTTTGGTTTTAAAATTGAGTGTGAGAAGTCTTTGCCTGACAACGTTATGGGTGATGAGAGGAGGGTTTTTCAGGTGATTCTCCATATGGTTGGGAACTTATTGGATGGTAATCACAGGGGAGGGATTCTCTTACTTCGTGTTCTTGCAGAAAGAGGAAGTCAGGAAAGAAATGACCATGGGTGGACAACCTGGAGACCAAGCTCATCTAGTGGGGACGTACATATTAGATTTGAGATAGGGATCAGTAGAGGCAATTATGAGTTGGAGAGTTCACTTTCTTTAGCAGTTGGCGGTAGGAAATATTCTAGTGGTAGAGATGAAGTCAGATTGAGCTTCAGCATTTGCAAGAAGATAGTTCAGTTGATGCAAGGGAACATATGGTTTGCACCAAATACCTTAGGTTATCCTCAAACCATGGCCCTTGTTCTTCGGTTTCATTTACAGCAGTCTATTTCTATTTTCATCTCTGAGCCAGGTGAATCCTCTGAGCGCACAGATTCCAATTCTCTGCTCAGAGGTCTGCAAGTCTTGTTGGCGGATCATGATGATGTAAATAGAGCTGTGACACAGAAGTTGCTTCAGAAGCTAGGTTGTGCCGTAACTTCAGTTTCTTCAGGATTTGAATGCCTTGCTGTCATTGCACCTGCTGGATCTTCTATTCAAGTCATTCTTTTGGATCTTCATATGCCTGAGTTAGATGGCTTTGAAGTTGCCACAAGGATTCGGAAATTTAGAAGCCGAAATTGGCCAATGATTGTTGCCTTGACTGCAAGTGCCGATGGAGATTTGTGTGAAAGATGTATGCAAATTGGTGTCAATGGAATTATAAGAAAACCTGTTATGTTGCAGGAAATTGCCAGGGAACTTCGGAGGATCCTGACGCATGCACGGAAATGA 2274 0.4235 MFKALASGLSILFLFKCVSATENEFPRCNCDDEASLWTIESILECQRVSDLLIAVAYFSIPIELLCFISCANVPFKWVLVQFIAFIVLCGLTHLLNAWTYGPHSFQLMVALTVFKTLTALVSCATAITLMTLIPLLLKVKVRELMLRKKTSELGREVGIIMRQKEAAKHVRMLTREIRKSLDRHNILYTTLVELSETLGLQNCAVWMPNFDKTEMNLTHELNRRNLNSSILITDPDVVRIKATDGVNILSPVSALAVASSGNASEVGPVAAIRMPMLRICNFKGGTPEVRQACYAILVLILPGGEPRSWSNQELEIVKTVADQVAVALSHAAILEESQHMREKLEEQNRILQQAQRNALMASQARNLSQKVMSDGMRRPMHSILGLLSIIQDENLKSEQKLIVDSMLRTSNVLSNWINDAMNISAKDDGGFQLEMRSFGLHAMIKEAACLAKCLCVYRGFGFKIECEKSLPDNVMGDERRVFQVILHMVGNLLDGNHRGGILLLRVLAERGSQERNDHGWTTWRPSSSSGDVHIRFEIGISRGNYELESSLSLAVGGRKYSSGRDEVRLSFSICKKIVQLMQGNIWFAPNTLGYPQTMALVLRFHLQQSISIFISEPGESSERTDSNSLLRGLQVLLADHDDVNRAVTQKLLQKLGCAVTSVSSGFECLAVIAPAGSSIQVILLDLHMPELDGFEVATRIRKFRSRNWPMIVALTASADGDLCERCMQIGVNGIIRKPVMLQEIARELRRILTHARK 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0212 757 Gene3D - 428 609 IPR036890 -
Lele20g0212 757 CDD REC_ETR-like 633 748 - -
Lele20g0212 757 PIRSF Ethylen_sen_hybr_HK 1 757 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Lele20g0212 757 SMART gaf_1 182 338 IPR003018 GO:0005515
Lele20g0212 757 Coils Coil 334 364 - -
Lele20g0212 757 FunFam Ethylene receptor 631 755 - -
Lele20g0212 757 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 25 756 - -
Lele20g0212 757 SUPERFAMILY GAF domain-like 186 331 - -
Lele20g0212 757 Gene3D - 615 755 - -
Lele20g0212 757 Pfam Response regulator receiver domain 635 747 IPR001789 GO:0000160
Lele20g0212 757 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 588 IPR003594 -
Lele20g0212 757 SMART REC_2 633 748 IPR001789 GO:0000160
Lele20g0212 757 SMART HisKA_10 364 429 IPR003661 GO:0000155|GO:0007165
Lele20g0212 757 CDD HisKA 362 424 IPR003661 GO:0000155|GO:0007165
Lele20g0212 757 FunFam Ethylene receptor 4 331 425 - -
Lele20g0212 757 Gene3D - 330 427 - -
Lele20g0212 757 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 418 594 IPR036890 -
Lele20g0212 757 Pfam GAF domain 182 328 IPR003018 GO:0005515
Lele20g0212 757 CDD HATPase_ETR2_ERS2-EIN4-like 470 602 - -
Lele20g0212 757 SUPERFAMILY CheY-like 631 753 IPR011006 -
Lele20g0212 757 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 350 429 IPR036097 GO:0000155|GO:0007165
Lele20g0212 757 Gene3D - 160 329 IPR029016 -
Lele20g0212 757 ProSiteProfiles Response regulatory domain profile. 634 752 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0212 Lele-ChrLele20 9595387 9598498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0212 22 755 Miscellaneous Gene Families AT3G04580 57.162 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele20g0212 GAF 1.7e-11 CL0161