Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0211 ATGGTGAGATTTGAATATAGCTTAATCTCTCTTCTTCGACTAGCAATTCTGGCTAATCCTTGGTGGACCGGTCATCAGGTGGGGTTGCCGGGGGTTGACCCGGCGGCCAATTCACCTGCGGTGAACAAACGGCACAGTACCGACCTCTCTATCAACGAAAGCAGCGGGAAGAACAACAGTGTCGGTGATAGAGATGAAGACGATGATAGAGATGAACCCAAAGAAGGTGCAGTTGAAGTCGGAACTCGCAGACCTCGAGGCCGACCACCTGGTTCGAAGAACAAGCCGAAACCGCCCATCTTCGTGACCCGAGACAGCCCAAATGCCCTCCGAAGCCATGTCATGGAGGTCGCCGGCGGAGCCGATGTAGCCGAAAGCGTAGCTCAGTTCGCTAGACGCCGTCAACGTGGGGTTTGTGTTCTTAGTGGAAGTGGTTCCGTCACCAACGTCACTCTTCGCCAACCTGCAGCTCCGGGCGCTCTTGTAGCACTCCATGGAAGGTTCGAGATTCTATCCCTAACCGGATCCTTCTTGCCGGGTCCCGCACCACCCGGATCCACGGGACTCACGGTTTACCTCGCTGGAGGGCAAGGTCAGGTCGTCGGCGGAAGCGTAGTGGGGTCACTAGTAGCAGCAGGACCAGTGATGGTAATTGCTGCAACTTTTGCTAATGCAACTTATGAGAGACTACCTCTTGATGATGAAGATGAAGGCGGCAACACGGCGGGGCAAGACGGTGGCAGTGGTGGAGGGTCTTCACCGCCACCGCCACAAGCGGGGATCGGAAGCAGTGGGGGCCACTTGCAGGGTGGGATTCCAGATCCTTCATCACTTCCTTTGTATAATCTGCCACCAAATCTGCTTCCCAATGGTGGTGGGCAGGTAGGTCATCATGAAGCTCTTGCTTGGGCAGCTCATGGAAGACAACCTTACTAG 936 0.5534 MVRFEYSLISLLRLAILANPWWTGHQVGLPGVDPAANSPAVNKRHSTDLSINESSGKNNSVGDRDEDDDRDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVTNVTLRQPAAPGALVALHGRFEILSLTGSFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDEDEGGNTAGQDGGSGGGSSPPPPQAGIGSSGGHLQGGIPDPSSLPLYNLPPNLLPNGGGQVGHHEALAWAAHGRQPY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0211 311 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 53 304 IPR014476 GO:0003680
Lele20g0211 311 Pfam Plants and Prokaryotes Conserved (PCC) domain 111 223 IPR005175 -
Lele20g0211 311 SUPERFAMILY AF0104/ALDC/Ptd012-like 107 235 - -
Lele20g0211 311 CDD DUF296 111 194 IPR005175 -
Lele20g0211 311 MobiDBLite consensus disorder prediction 40 58 - -
Lele20g0211 311 ProSiteProfiles PPC domain profile profile. 107 245 IPR005175 -
Lele20g0211 311 MobiDBLite consensus disorder prediction 231 295 - -
Lele20g0211 311 PIRSF ESCAROLA 31 311 IPR014476 GO:0003680
Lele20g0211 311 Gene3D - 110 238 - -
Lele20g0211 311 MobiDBLite consensus disorder prediction 38 108 - -
Lele20g0211 311 FunFam AT-hook motif nuclear-localized protein 110 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0211 Lele-ChrLele20 9570903 9573089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0211 17 311 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 61.409 1.25e-99 293