Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0190 ATGCTGGTAATAGAGGTCAACGCAACCGACGTTGAGTATCTTCAAGCTCGCGTCACAAGCCGCTCTCACACAAGGAAGGCATTAAGAGCCTTGAAAGGATTAGTGAAGATTCAAGCACTCGTGAGAGGATTTCTAGTTCGAAAGCCATCAGCTGCAACACTTCACAACATGCATAAAGTTTCTTCAAGCTCGCCTCACAAGCCGGATCCCGCGGATATCAAGCTTGCCGTCGGCAAAGGTTTTGTAACTCAATTGATGGGGAATAGAAAGAAAAACAACCGCACACGTTCGAAACAATCTAAGTCAAAGTCGGGTACCAGTTCTAGTCACAATACTCAAGCCAACACAGCTGAAGTTAAATGGTTTGATGAAAGGCCAGAGTCATCCCAATCCGAGAACAAAAGTGACAGCGATGAGGAGACATTGGGTTCATCATCAACATCTGAGCAAGGGGCTAGGTGGAGGTTGAGGATAGATCGGGTTCATGCCTCTGCTGCTGTTGAAATGCTTGAAGAAAAAGCAAAATCCCAAGACACTAACAAATCTGAGGAAACTAATATTACAGAAGGTATTGAAGGATCTGTAGATTCCTCTGCAGCTGTAAAAATGCTTGAAGATGATCAAGCAAAACCCGAAGACACTAATAAATCTGAGGAAACTAATATTACACAAGGTGTTGAAGTTGAAGGGTCTGTAGCAGATTCCATTTGGCCAAAATCAGATGACTCTAAGCGTGCACAACTTCTTCAGAAAATTCATAGAGGATTTGATGTACTTATTAGACACAAATATCTGGCTACTGGTCATCTTAACAAGGTCATTAAATTTTCCATGGATAAGATCCAGGGACTTGCTGCTCGAGCTAAGCTCATGCAGCAGCATTTAGACCGATCAGCCACATGCATATGCTTTTTGGAAGCCCGCGAACTTGGGGAAATTTTCAAATTTTTGCTAGAACTAACTCATGCTTGTGGTTTGTCAATATGCGCTGATAAAAGAGCAGAAAGGTGTAAACTTGAGTTAGAGAAACAAAAGGGCCTTGCTGAGAAACAGAGAGATCTGAAAGAAGGAGAAATTGATGAGGAAGAAGAGAACAAAAAACTCTCAGAACAACTTGAAGAAAATGTTAAGTTAAAACGGCGCATATTAGATGAGGCGAAAAAGAAGCGCCTTGCTGAGAAACGGAGAGATCTGAAAGAAGGAGCAGAAAGGTGTAAACTTGAGTTAGAGAAAGAGGAAGCAAAGAGCTCAGAAATTGAGGCTGAACAAAAGGGCATTGCTGAGAAACATAGAGATCTGAAAGAAGGAGTAGAAAGGCGTAAACTTGAGTTAGAAAAAGTGGAAGCTAAACTTGCAGAAATTGAGGCTGAACAAAAGCGCCTTGCCGGGCAACACAGAGATCTAAAAGAAGAAGTAGAAAAGCGTAAACTTGAGTTAGAGAAAGAGGAAGCAAAGCTCTCAGAAATTGAGGCTGAATAA 1479 0.4185 MLVIEVNATDVEYLQARVTSRSHTRKALRALKGLVKIQALVRGFLVRKPSAATLHNMHKVSSSSPHKPDPADIKLAVGKGFVTQLMGNRKKNNRTRSKQSKSKSGTSSSHNTQANTAEVKWFDERPESSQSENKSDSDEETLGSSSTSEQGARWRLRIDRVHASAAVEMLEEKAKSQDTNKSEETNITEGIEGSVDSSAAVKMLEDDQAKPEDTNKSEETNITQGVEVEGSVADSIWPKSDDSKRAQLLQKIHRGFDVLIRHKYLATGHLNKVIKFSMDKIQGLAARAKLMQQHLDRSATCICFLEARELGEIFKFLLELTHACGLSICADKRAERCKLELEKQKGLAEKQRDLKEGEIDEEEENKKLSEQLEENVKLKRRILDEAKKKRLAEKRRDLKEGAERCKLELEKEEAKSSEIEAEQKGIAEKHRDLKEGVERRKLELEKVEAKLAEIEAEQKRLAGQHRDLKEEVEKRKLELEKEEAKLSEIEAE 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0190 492 MobiDBLite consensus disorder prediction 99 118 - -
Lele20g0190 492 Coils Coil 345 422 - -
Lele20g0190 492 Pfam Protein of unknown function (DUF629) 173 361 IPR006865 -
Lele20g0190 492 ProSiteProfiles IQ motif profile. 32 59 IPR000048 GO:0005515
Lele20g0190 492 Coils Coil 427 492 - -
Lele20g0190 492 PANTHER UBIQUITIN SPECIFIC PROTEINASE 176 371 - -
Lele20g0190 492 MobiDBLite consensus disorder prediction 120 139 - -
Lele20g0190 492 MobiDBLite consensus disorder prediction 411 432 - -
Lele20g0190 492 MobiDBLite consensus disorder prediction 83 155 - -
Lele20g0190 492 MobiDBLite consensus disorder prediction 170 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0190 Lele-ChrLele20 9285192 9292479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0190 164 327 C2H2 Transcription Factor Family AT3G47890 40.000 3.72e-27 114