Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0178 ATGGAGGAGGAGAAGAAAGAGAAAGAAGTGCGGTACCGTGGTGTCCGACGGCGGCCATGGGGGAAGTTTGCAGCGGAGATAAGAGACCCGAGAAAGCAAGGGGCAAGGCTGTGGTTGGGGACATTTGAGAGAGCTGAAGAAGCAGCAAGAGCTTATGACCAAGCAGCTTACAACTTTAGAGGACAGCTTGCAGTTCTTAACTTCCCCGAACACTTCAATCTTCCTCCGCCGCCGCCATATCAACCATTCTCTTCTTCATCGTCTTCTTCTTATGGAGCTGGTGACATTAGTGCAAGTTCCTCAACAACTACGGCTGCTGAAGAACAACACTTGCAAAGGGAAGTTATTGAGTTTGAGTGTTTGGATGATAAGGTATTAGAAGAGCTTCTTGAATCTCTAGAGAAGAACAACAACAAACAAGATTGA 426 0.4695 MEEEKKEKEVRYRGVRRRPWGKFAAEIRDPRKQGARLWLGTFERAEEAARAYDQAAYNFRGQLAVLNFPEHFNLPPPPPYQPFSSSSSSSYGAGDISASSSTTTAAEEQHLQREVIEFECLDDKVLEELLESLEKNNNKQD 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0178 141 ProSiteProfiles AP2/ERF domain profile. 11 69 IPR001471 GO:0003700|GO:0006355
Lele20g0178 141 SMART rav1_2 11 75 IPR001471 GO:0003700|GO:0006355
Lele20g0178 141 MobiDBLite consensus disorder prediction 84 109 - -
Lele20g0178 141 SUPERFAMILY DNA-binding domain 11 70 IPR016177 GO:0003677
Lele20g0178 141 PRINTS Ethylene responsive element binding protein signature 12 23 IPR001471 GO:0003700|GO:0006355
Lele20g0178 141 PRINTS Ethylene responsive element binding protein signature 35 51 IPR001471 GO:0003700|GO:0006355
Lele20g0178 141 Pfam AP2 domain 11 61 IPR001471 GO:0003700|GO:0006355
Lele20g0178 141 FunFam Ethylene-responsive transcription factor 2 10 70 - -
Lele20g0178 141 MobiDBLite consensus disorder prediction 70 109 - -
Lele20g0178 141 CDD AP2 11 71 IPR001471 GO:0003700|GO:0006355
Lele20g0178 141 PANTHER DNA-BINDING DOMAIN 4 134 IPR044808 GO:0003700|GO:0009873
Lele20g0178 141 Coils Coil 123 141 - -
Lele20g0178 141 Gene3D AP2/ERF domain 10 71 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0178 Lele-ChrLele20 9151161 9151586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0178 7 135 AP2-EREBP Transcription Factor Family AT3G23230 58.955 6.29e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele20g0178 AP2 8.4e-14 CL0081