Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0176 ATGAGCTTTCAGTTTCTCCGTTCACAGTTATTATGTCTGCTAGTTTCAGTTTCTTGTTTGCTTATTATTGCTTGTTTGGGAGACAATGCCGACATAGCTGCACAATTGAACGATGATGTTCTTGGTCTTATAGTGTTTAAATCCGACCTTAATGACCCTTCTGGTCATCTTGCTTCATGGAATGAGGATGATTTAAATGCTTGCTCGTGGCGGTTCGTGCAGTGTAATCCGTCTACCGGCAGAGTTTCAGGTGTCTCACTCGACGCATTAGGCTTATCTGGGAAAATAGGAAGAGGTCTTGAGAAGTTGCAGTATCTTAAGGTATTGTCACTGTCTCATAACGACATAACTGGAAGTATTAGTCCATTGCTTTCGCTTTCAAACACTCTTCAAAGCTTAAACCTCAGTCACAACAGCTTATCTGGTTCTATTCCAAGTTCATTTGTGAATATGGCTTCAATGAAATCTCTTGATTTATCAGAGAATTCATTCTCAGGACAAGTTCCAGAAAGCTTGTTCGAGAACTGTTTTTCCCTTCACCATCTTTCTCTGTCTAGGAACATGTTTGAAGGATCAATTCCTAATACAATCTCAAGATGTTCCTTATTGAACAGCCTCGATCTTTCAAAAAATCGGTTCGGTGGTAGCGTGGACTTCAATGGGATTTGGTCTTTGACAAGGCTTAGAACTCTGGATCTGTCAAATAATGCCTTATCTGGAAATTTGCCTCCTGGAATATCAGCCATACATAACTTGAAAGAGATGAAACTACAAAGTAATCACTTTTCAGGACCATTACCTTCTGATATTGGATTCTGCTTGCATTTGAATACGTTGGATTTTAGTGATAATCTATTCAATGAAGCACTTCCAGAATCGATTGGGAGACTTCAATTTTTGACCTTTTTCAAGGCATCAAATAATTTGTTAACCAAGGAAATCCCTCAATGGATTGGTAACATGGCAATTTTAGAATACCTTGATCTCTCAGGCAATCAGTTATCCGGGAACATCCCGGATTCAATCGGCGATTTGAGATCGCTGAGTTATCTCGGTCTTTCGAACAACAAGCTCGAGGGAAACATTCCATCATCATTGGTTTCATGTACTAAGTTATCATCAATTCATCTTAGAGGTAATGGTTTAAATGGTAACATACCAGAGGGACTGTTTGGCTTGGAATCATTAGAGGAAATAGACCTGTCCCATAATTTTCTAAAGGGTGAAATCCCAGAAGAAATGATTCATTCTTCTAAACTAAAATATTTGAATATATCTTGGAATGATTTTCACTCCCAAATGCCTCCAGAATTGGGTATGCTTCAGAATCTGACAGTTTTAGATCTTCAGAGCAATTCACTATATGGTTCTATTCCAGAGGATTTATGTGATTCAGGAAATTTGGCTATTCTTCAACTCGATGGAAACTCATTGAATGGTCCTATCCCAGATGAGATTGGAAATTGTTCATCTCTTTTCTTGCTGAGCTTGTGTCACAATAACTTGAGTGGATCAATTCCAAAGTCCATGTCAAAGCTTAAAGAGCTCAAAGTTCTGAAATTGGAATTCAATGAACTGAGTGGAGAGATACCACAGGAGCTTGGATTGCTGCAGAATCTTCTTTCTTTGAATATATCATACAACAGGTTCACAGGAAGGCTTCCTAGTGGCAGCATATTTCAAAACTTAGACAAAAGTTCCCTAGAAGGAAACTTAGGTCTTTGTTCACCCTTATTGAAAGGTCCATGTAAGATGAATGTGCCAAAGCCACTGGTTCTTGACCCAAATGCTTATAGCAACCAAATGGGTACGCCAAGAAATGAATCATCCCCGAGTACGCCGAGCATCATGCATCGCCACCGGTTCCTGAGTGTTTCTGTTATTGTTGCAATTTCTGCAGCTTTCGTGATTATATTGGGTGTGATTGCTATTAGCCTTTTGAATGTTTCTGTGAGGAGAAGGCTGGCATTTGTTGATAATGCTTTGGAAAGCATGTGTTCGAGCTCTTCAAAATCAGGAAGTCCGCCCACAGGAAAGCTCATTCTGTTCGATTCGGGCCGGTCCTCACTCGATTCGATCAGCAACCCAGAAAACTTGCTGAACAAGGCATCCGAAATAGGAGACGGAGTGTTTGGAACTGTTTACAAGGCTCCTTTGGGATCACAAGGAAGAATGGTGACAATCAAGAGACTTGTCACTTCAAACATAGTCCATTACCCTGAAGACTTTGATAGGGAAGTAAGAATCTTAGGGAAAGCAAGGCACCCTAATCTAATAGCATTGGAAGGATACTATTGGACTCCTCAACTGCAACTTTTGGTCACAGAATATGCACCAAATGGTAGCTTGCAATCCAAGCTTCACGACCGGCTTCCTTCATCTCCACCTCTTTCATGGCCTAATAGGTTCAAAATTTTGCTTGGAACAGCAAAAGGGCTCGCTCACTTACACCATTCATTCCGCCCACCAATCATTCACTATGACCTGAAGCCAAGCAACATTCTACTTGACGAGAACTTCAATGCGAAGATATCAGATTTCGGGCTGGCCAGGCTTCTGACAAAGCTAGACAGGCACGTGATGAGCAATAGGTTTCAGAGCGCATTAGGATATGCAGCACCAGAATTGGCATGCCAGAGCTTGAGGGTGAATGAGAAGTGCGATATCTACGGCTACGGGGTGATGATTCTCGAGCTCGTGACTGGAAGGAGACCGGTCGAATACGGAGAAGACAACGTTGTGATCCTAAAAGACCATGTCCGGGTGATGCTTGAGCAAGGAAATGTGTTGGAATGTGTGGATCCAAACATGAGTGAGTATCCAGAAGATGAAGTTCTCCCAGTTCTGAAACTTGCATTGGTATGCACCTCACAGATTCCTTCAAGCAGACCTTCAATGGCAGAAGTAGTTCAAATTCTGCAAGTTATCAAAACTCCTGTTCCTCACAGAATGGAAATGTTTTAG 2964 0.414 MSFQFLRSQLLCLLVSVSCLLIIACLGDNADIAAQLNDDVLGLIVFKSDLNDPSGHLASWNEDDLNACSWRFVQCNPSTGRVSGVSLDALGLSGKIGRGLEKLQYLKVLSLSHNDITGSISPLLSLSNTLQSLNLSHNSLSGSIPSSFVNMASMKSLDLSENSFSGQVPESLFENCFSLHHLSLSRNMFEGSIPNTISRCSLLNSLDLSKNRFGGSVDFNGIWSLTRLRTLDLSNNALSGNLPPGISAIHNLKEMKLQSNHFSGPLPSDIGFCLHLNTLDFSDNLFNEALPESIGRLQFLTFFKASNNLLTKEIPQWIGNMAILEYLDLSGNQLSGNIPDSIGDLRSLSYLGLSNNKLEGNIPSSLVSCTKLSSIHLRGNGLNGNIPEGLFGLESLEEIDLSHNFLKGEIPEEMIHSSKLKYLNISWNDFHSQMPPELGMLQNLTVLDLQSNSLYGSIPEDLCDSGNLAILQLDGNSLNGPIPDEIGNCSSLFLLSLCHNNLSGSIPKSMSKLKELKVLKLEFNELSGEIPQELGLLQNLLSLNISYNRFTGRLPSGSIFQNLDKSSLEGNLGLCSPLLKGPCKMNVPKPLVLDPNAYSNQMGTPRNESSPSTPSIMHRHRFLSVSVIVAISAAFVIILGVIAISLLNVSVRRRLAFVDNALESMCSSSSKSGSPPTGKLILFDSGRSSLDSISNPENLLNKASEIGDGVFGTVYKAPLGSQGRMVTIKRLVTSNIVHYPEDFDREVRILGKARHPNLIALEGYYWTPQLQLLVTEYAPNGSLQSKLHDRLPSSPPLSWPNRFKILLGTAKGLAHLHHSFRPPIIHYDLKPSNILLDENFNAKISDFGLARLLTKLDRHVMSNRFQSALGYAAPELACQSLRVNEKCDIYGYGVMILELVTGRRPVEYGEDNVVILKDHVRVMLEQGNVLECVDPNMSEYPEDEVLPVLKLALVCTSQIPSSRPSMAEVVQILQVIKTPVPHRMEMF 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0176 987 Gene3D Phosphorylase Kinase; domain 1 700 781 - -
Lele20g0176 987 Gene3D Ribonuclease Inhibitor 297 586 IPR032675 -
Lele20g0176 987 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 197 291 - -
Lele20g0176 987 SMART LRR_typ_2 225 249 IPR003591 -
Lele20g0176 987 SMART LRR_typ_2 537 562 IPR003591 -
Lele20g0176 987 SMART LRR_typ_2 513 536 IPR003591 -
Lele20g0176 987 SMART LRR_typ_2 151 175 IPR003591 -
Lele20g0176 987 SMART LRR_typ_2 345 369 IPR003591 -
Lele20g0176 987 SMART LRR_typ_2 321 344 IPR003591 -
Lele20g0176 987 SMART LRR_typ_2 393 417 IPR003591 -
Lele20g0176 987 SMART LRR_typ_2 441 465 IPR003591 -
Lele20g0176 987 Gene3D Ribonuclease Inhibitor 194 290 IPR032675 -
Lele20g0176 987 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 85 218 - -
Lele20g0176 987 SUPERFAMILY RNI-like 220 555 - -
Lele20g0176 987 ProSiteProfiles Leucine-rich repeat profile. 105 127 IPR001611 GO:0005515
Lele20g0176 987 Gene3D Ribonuclease Inhibitor 37 193 IPR032675 -
Lele20g0176 987 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Lele20g0176 987 PRINTS Leucine-rich repeat signature 225 238 - -
Lele20g0176 987 PRINTS Leucine-rich repeat signature 130 143 - -
Lele20g0176 987 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 694 777 - -
Lele20g0176 987 Pfam Leucine rich repeat 306 358 IPR001611 GO:0005515
Lele20g0176 987 Pfam Leucine rich repeat 371 430 IPR001611 GO:0005515
Lele20g0176 987 Pfam Leucine rich repeat 105 163 IPR001611 GO:0005515
Lele20g0176 987 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 292 386 - -
Lele20g0176 987 SUPERFAMILY L domain-like 87 290 - -
Lele20g0176 987 CDD STKc_IRAK 706 974 - -
Lele20g0176 987 FunFam Inactive leucine-rich repeat receptor-like protein kinase 393 586 - -
Lele20g0176 987 SMART serkin_6 700 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0176 987 ProSiteProfiles Protein kinase domain profile. 700 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0176 987 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 36 196 - -
Lele20g0176 987 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 778 982 - -
Lele20g0176 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
Lele20g0176 987 Pfam Protein kinase domain 702 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0176 987 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Lele20g0176 987 SUPERFAMILY Protein kinase-like (PK-like) 700 982 IPR011009 -
Lele20g0176 987 Gene3D Transferase(Phosphotransferase) domain 1 782 984 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0176 Lele-ChrLele20 9133729 9136921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0176 7 984 Receptor kinase-like Gene Family AT3G28040 61.424 0.0 1182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lele20g0176 Pkinase 1e-43 CL0016