LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele20g0144	ATGGATTCTCCTGGTAGTGGTGGTTCTGGTTCTGCTGATGTTGTTATGGACCAGAAGAAGAGGAAGAGGATGCTGTCGAATCGGGAGTCGGCGCGGCGATCGAGGATGAAGAAGCAGCAACATCTGGATGATCTGGTGAGGCAAGTGGGAGATCTGAGGAAGGAGAATGAAGAGATCATGAAGAACTTGAGCTTCACCAACCAACTTTTTCTGAACATGGAGTCTGAAAATGCAATCTTGAGGACTCGGATGGCTGAGTTGACCAACAGATTGGAATCTCTCAATGAGATCATAAGTTACATAAACAGCAGCTCAGCCAATATTTATCTCTTTGATGATGATCATAATGAGACTGAAATCATCAATGATTGTGACTTCTTCTTCAACCCTAATTGGAATCAACCAATCATGGCTTCTGGTGGCAATAATATGATGCATTAA	441	0.4308	MDSPGSGGSGSADVVMDQKKRKRMLSNRESARRSRMKKQQHLDDLVRQVGDLRKENEEIMKNLSFTNQLFLNMESENAILRTRMAELTNRLESLNEIISYINSSSANIYLFDDDHNETEIINDCDFFFNPNWNQPIMASGGNNMMH	146

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele20g0144	146	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	17	80	IPR004827	GO:0003700\|GO:0006355
	Lele20g0144	146	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	22	37	IPR004827	GO:0003700\|GO:0006355
	Lele20g0144	146	SUPERFAMILY	Leucine zipper domain	19	73	IPR046347	GO:0003700\|GO:0006355
	Lele20g0144	146	Pfam	bZIP transcription factor	19	77	IPR004827	GO:0003700\|GO:0006355
	Lele20g0144	146	SMART	brlzneu	15	79	IPR004827	GO:0003700\|GO:0006355
	Lele20g0144	146	Coils	Coil	42	62	-	-
	Lele20g0144	146	CDD	bZIP_plant_GBF1	20	70	IPR045314	GO:0003700\|GO:0006355
	Lele20g0144	146	Coils	Coil	70	97	-	-
	Lele20g0144	146	MobiDBLite	consensus disorder prediction	1	42	-	-
	Lele20g0144	146	PANTHER	BZIP TRANSCRIPTION FACTOR 44	7	108	-	-
	Lele20g0144	146	FunFam	BZIP transcription factor	17	68	-	-
	Lele20g0144	146	MobiDBLite	consensus disorder prediction	15	42	-	-
	Lele20g0144	146	Gene3D	-	17	73	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele20g0144	Lele-ChrLele20	8699242	8699682	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele20g0144	15	140	bZIP Transcription Factor Family	AT4G34590	50.000	1.49e-34	116

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Lele20g0144		bZIP_1	8.5e-10	CL0018