Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0123 ATGTTTTCTCTTCATCGTCATCATCATCATCATCAGTTTCTTGCATGTTTCTTCTTTCTGATGTGTCTGGTGGGCTTATTGGGATCTGCAGAATTAGCAAGTGCACAGTATTATCAGAAAATCGGAGAGAAACTTGTCCGTTACTGGAAGATCACCGTCGACCCCGCCGGCACCGGCAACTTCACCACAATACAAGAAGCCATAAACTCAATCCCTTCCAACAATAACAACTGGGTTTCCATCAATGTAAAGCCAGGCATCTATAGGGAAAAAGTGAGGATCCCTGATGATAAGCCTTATATAGTATTGAAAGGAGCAGGGAAGAAGAGAACTATCGTGGTTTGGGATGATCATGAAACAGTTGCACAGAGTCCTACGTTTACGTTGCTGGCTGATAATGTTGTCGTCAAATGCTTGAGCTTTCGGAATTCCTACAATAATCCGATTAACAGCAACCAGAGGAAGCCGGCGGTGGCGGCAATGGTGGCCAGCGATAAGGCTTTCTTCTTTCGAGTAGGCTTCTTTGGTTTACAAGACACCTTGTGGGATGATCAAGGAAGGCATTACTATAAACTTTGTACCATTCAAGGTGCTGTTGATTTTATTTTTGGTGCTGGCCAATCTGTATTTGAGAGATGTTCAATATCAGTGATTGCTGGAGCCCTAGATGGGCTACCAGGGTTTATAACAGCACAAGGAAGAACAAATCCAAATGATGCAAATGGATTTGTGTTCAAAGACTGCCACGTGTTCGGGAATGGAACAACATACTTGGGAAGGCCTTGGAGAAGTTATTCAAGAGTTCTCTTCTACAAAACCAATATGTCTCAAGTTGTTGAACCAAAGGGTTGGCAGCCTTGGAGCTTTGCTACAAATTTGAATAGGGTAACATTTGCAGAATATGGGTGTTTTGGGCCTGGGTCTAACACATCCCAAAGAGTGAGCTGGTCAAAGAAGAATGTTGATTCATTATATGTGGAGCAAATGGCTAATATGAGCTTCATTGATTCTGAAGGATGGCTTCAGAATCAACTTTTCTGA 1041 0.4265 MFSLHRHHHHHQFLACFFFLMCLVGLLGSAELASAQYYQKIGEKLVRYWKITVDPAGTGNFTTIQEAINSIPSNNNNWVSINVKPGIYREKVRIPDDKPYIVLKGAGKKRTIVVWDDHETVAQSPTFTLLADNVVVKCLSFRNSYNNPINSNQRKPAVAAMVASDKAFFFRVGFFGLQDTLWDDQGRHYYKLCTIQGAVDFIFGAGQSVFERCSISVIAGALDGLPGFITAQGRTNPNDANGFVFKDCHVFGNGTTYLGRPWRSYSRVLFYKTNMSQVVEPKGWQPWSFATNLNRVTFAEYGCFGPGSNTSQRVSWSKKNVDSLYVEQMANMSFIDSEGWLQNQLF 346
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0123 346 FunFam Pectinesterase 46 345 - -
Lele20g0123 346 Pfam Pectinesterase 51 336 IPR000070 GO:0030599|GO:0042545
Lele20g0123 346 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 50 342 - -
Lele20g0123 346 ProSitePatterns Pectinesterase signature 2. 195 204 IPR033131 -
Lele20g0123 346 Gene3D - 48 346 IPR012334 -
Lele20g0123 346 SUPERFAMILY Pectin lyase-like 51 342 IPR011050 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele20g0123 Lele-ChrLele20 8327865 8332125 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0123 11 287 Carbohydrate Esterase AT2G19150 43.772 3.07e-77 237