Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0117 ATGGACACATCCAACTATACACATGTATATAGACTTGGAAAAAGCAATAATACCAATAAACAACCATGCATTTTTCTTGAAGGAGCTGAAAGTTCTTCTACATTTCTTGAGTGGAGTGATCATAACCAAACGAATCAAAGTTATACTTTTGAGTCAAATGCACCTAACGTTATAGCCAAGGGAATTGCATTCGTGAACTTGTATAATCATCCGCGGGGGGAAGATGAAGGTGAGAGAATTCTGCCAGCAGTAGCCGCAGCAGTGAGAGGAGACAAAATTGCATTCTATGATCGTGGCTTCAAAGGATGCCGCGTGGATGGAATTGGAAAAACCATCCTTGGAAGACCTTATGGGCCATATTCTAGGGTCATTTTCGCCAATTCCTATCTCTCTCGTGTGGTTGACCCTGTGGATTGGAATGCTTGGAATCAACACGACTTAAAAAAGATCACATTTGTAGAGGAAGGAAACAAAGGACCAGGGGCAAATAAGTCAAAGCGAGTGCCGTGGATGAAGCACATGACTAAGAAGGAGCTCAAGAAGTTCTTGGATCACTCTTATATCGATTATGAGGGGTGGCTACAGAACCAACCAAGTAGTTTTAATTCTAAAAAGTTGATAAAGTTAAAATAA 633 0.4076 MDTSNYTHVYRLGKSNNTNKQPCIFLEGAESSSTFLEWSDHNQTNQSYTFESNAPNVIAKGIAFVNLYNHPRGEDEGERILPAVAAAVRGDKIAFYDRGFKGCRVDGIGKTILGRPYGPYSRVIFANSYLSRVVDPVDWNAWNQHDLKKITFVEEGNKGPGANKSKRVPWMKHMTKKELKKFLDHSYIDYEGWLQNQPSSFNSKKLIKLK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0117 210 Gene3D - 6 101 IPR012334 -
Lele20g0117 210 Pfam Pectinesterase 109 189 IPR000070 GO:0030599|GO:0042545
Lele20g0117 210 Gene3D - 102 206 IPR012334 -
Lele20g0117 210 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 100 195 - -
Lele20g0117 210 SUPERFAMILY Pectin lyase-like 19 197 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0117 Lele-ChrLele20 8223611 8228327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0117 83 195 Carbohydrate Esterase AT1G05310 35.088 6.63e-17 76.3