Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0057 ATGACTAAGAAATTGAAGCAGGAGAAGCTGTTGATTGTGATACCGGAGTCGAATATTGATATAGGGTGCGTCAAAGAAAATAAGATTAAGGAAGAAGTTGAAGGCGTAATGGGTGACGATTGTGGTGGGTTACGCGCACATAAGGGAGCTGGGCAAGAAGATGATGGGAAAGATGCTTTTCCTGAGTCGGTTCAAGTAGGAGGATCACCTTTGTACAAGGTAGGCAGGAAGTTGGGTAAAGGTGGGTTTGGTCATGTTTTTGTTGGCCAACGCAAAACTGGTTGTAATGGACGGATGCCAGCTCCTGGTGCTATGGAGGTGGCGCTGAAATTTGAACATAAAAGCAGTAAAGGATGTAACCATGGTCCACCTTGTGAGTGGCAAGTGTACAACACCCTTGGTGGTAGTCATGGAATTCCTAAAGTGCACTATAAAGGAAGACAAGGAGAATATTATGTAATGGTCATGGACATGCTTGGACCTAGCTTGTTTGATTTATGGAATTCCTTAAGTCAGGCGATGTCTGTTGAAATGGTTGCACGAATAGCGGCTGAGTCCTTATCAATCCTAGAGAACATGCACTCGAAAGGTTATGTGCATGGAGATATAAAACCAGAGAACCTTTTGCTTGGTAAGCCAAACACACCGCAAGAGAAGAAATTATTTTTTGTGGACCTTGGATTAGCAACGAAGTGGAGAGACGCCTCTAGTGGGCAGCATGTTGAATATGATCAACACCCTGATATTTTTAGAGGGACTGTTCGATATGCTAGTGTTCATGCACACTTGGGAAGAACTGCCAGTAGAAGGGATGATCTTGAATCTCTTGCATATACACTCATATTTCTTCATAAAGGTCGGTTACCTTGGCAAGGAATCCAGGGTGATCACAAATCCTTCCTTGTTTGCAAAAAGAAGATGGGAACATCTCCCGAGTTGATGTGTTGCTTCTGTCCTGCTCCTCTTAAGAAGTTTTTTGAGATTGTCGTGAACTTGAAATTTGATGAAGAACCTAATTATTCCAAGCTAATATCATTGTTTGATGGCATGATTAAAACTAATCCTGCTTTTTGCCTGATCAATACTGAAGGTGCACAAAAGGTTGGACAAAAGCGAGGGAGATTGAATTCTGGGGGAGATGATCCACAACCTGTAAAGAAGTTTCGTTTAGGCATTACTGCTACCCAGTGGATATCAATTTATGATACGAGAAAACCAATGAAACAAAGGTATCATTATAATGTGACTGATACGGGTTTAGCACAGCATGTGGAGAAGGGGATTACAGATGGCATCCGTATCAGTTGTGTGGCATCCCGTTCCAATCTTTGGTCTCTTATTATGGATGCTGGAACTAGTTTTACAACTCAAGTTTTCAAACTGTCGCCTTTCTTTTTACACAAGGAATGGATCATGGAGCAGTGGAAAAAGGATTTTTACATCACATCTGTTGCTGGGGCCGATAATGGGAGCTCTCTTGTGGTGATGTCAAAAGGTACACAATATACTCAACAATCATACAAAGCAAGTGATTCTTTCCCCTTCAAATGGATAAACAAGAAATGGGGAGAAGGTTTTCATGTGACCTCTATGGCTACAGCCAGGAGTCGTTGGGGTGTTGTTATGTCACGAAATTCTGGATTCAGTCATCAGGTGGTTGAACTTGATTTCCGTTATCCGAGTGAGGGCATTCACAAACGTTGGGACAAGGGTTACAGGGTAACTGCAATGGCTGCCACATCAGATCAAGTTGCTCTGATATTAAGCATTCCAAGACGCAAGCCCTCTGACCAAGGTCAAGAAACTTTGCGTACGAACGATTTTCCCAGCACACATGTTAAGGAAAAATGGGCAAAGAATATGTTTGTTTCTTGTTTGAGCTATGGGCGCACAGATGGTGATGATGAGGTTTTCGACGAAGGCAACGAACTCGATGATGAAGGTGTTCAGGTTGAAAAGGTTCTAATGGAGGAGAAGAAAGAAGAATGA 1989 0.4248 MTKKLKQEKLLIVIPESNIDIGCVKENKIKEEVEGVMGDDCGGLRAHKGAGQEDDGKDAFPESVQVGGSPLYKVGRKLGKGGFGHVFVGQRKTGCNGRMPAPGAMEVALKFEHKSSKGCNHGPPCEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLFDLWNSLSQAMSVEMVARIAAESLSILENMHSKGYVHGDIKPENLLLGKPNTPQEKKLFFVDLGLATKWRDASSGQHVEYDQHPDIFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGIQGDHKSFLVCKKKMGTSPELMCCFCPAPLKKFFEIVVNLKFDEEPNYSKLISLFDGMIKTNPAFCLINTEGAQKVGQKRGRLNSGGDDPQPVKKFRLGITATQWISIYDTRKPMKQRYHYNVTDTGLAQHVEKGITDGIRISCVASRSNLWSLIMDAGTSFTTQVFKLSPFFLHKEWIMEQWKKDFYITSVAGADNGSSLVVMSKGTQYTQQSYKASDSFPFKWINKKWGEGFHVTSMATARSRWGVVMSRNSGFSHQVVELDFRYPSEGIHKRWDKGYRVTAMAATSDQVALILSIPRRKPSDQGQETLRTNDFPSTHVKEKWAKNMFVSCLSYGRTDGDDEVFDEGNELDDEGVQVEKVLMEEKKEE 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0057 662 Pfam Protein kinase domain 72 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0057 662 CDD STKc_CK1 72 347 - -
Lele20g0057 662 Gene3D Transferase(Phosphotransferase) domain 1 47 374 - -
Lele20g0057 662 ProSitePatterns Protein kinases ATP-binding region signature. 78 110 IPR017441 GO:0005524
Lele20g0057 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Lele20g0057 662 ProSiteProfiles Protein kinase domain profile. 72 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0057 662 SUPERFAMILY Protein kinase-like (PK-like) 72 353 IPR011009 -
Lele20g0057 662 SMART serkin_6 72 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0057 662 PANTHER CASEIN KINASE-RELATED 72 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0057 Lele-ChrLele20 5122782 5135264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0057 1 295 AGC Kinase Gene Family AT3G08720 24.000 6.16e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lele20g0057 Pkinase 1.1e-16 CL0016