Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000278g0010 ATGGAAATGAAAGAATCTGGAGTAATTAATGAACAAAATATTGCGGAATCAAAAGTGGCTCTAGTCTACGGTCAGATGAATGAACCGCCGGGAGCTCGTATGAGAGTTGGTTTGACCGCTCTAACCATGGCGGAATATTTCCGAGATGTTAATGAACAAGACGTACTTCTATTTATCGACAATATCTTCCGTTTCGTCCAAGCGGGATCTGAAGTATCCGCCTTATTGGGTAGAATGCCCTCCGCTGTGGGTTATCAACCTACCCTTAGTACCGAAATGGGTACTTTACAAGAAAGAATTACTTCTACCAAAGAGGGGTCCATAACTTCTATTCAAGCGGTTTATGTACCTGCAGACGATTTGACCGACCCCGCTCCTGCCACGACATTTGCACATTTAGATGCTACTACCGTACTATCAAGAGGGTTAGCTGCCAAAGGTATCTATCCAGCAGTAGATCCTTTAGACTCAACGTCAACTATGCTCCAACCTCGGATCGTTGGTGAGGAACATTATGAAACTGCGCAAAGAGTTAAGCAAACTTTACAACGTTACAAAGAACTTCAGGACATTATAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGGATCGCTTAACCCAATTTGAAGAAATGACCTTAAATCTTTGTGTACTGACCCCTAATCGAATTGTTTGGGATTCAGAAGTGAAAGAAATCATTTTATCTACTAATAGTGGACAAATTGGCGTATTGCCAAATCACGCGCCTATTGCCACAGCTGTAGATATAGGTATTTTGAGAATACGTTTTAACGACCAATGGTTAACGATGGCTCTGATGGGTGGTTTTGCTAGAATAGGTAATAATGAGATCACTATTTTAGTAAATGATGCGGAGAAGAGTAGTGACATTGATCCCCAAGAAGCTCAGCAAACTCTTGAAATAGCGGAAGCTAACTTGAGGAAAGCTGAAAGTAAAAGACAAACAATTGAAGCAAATTTAGCTCTCAGACGAGCTAGAACACGGGTAGAAGTTATTACCACGAATTCGTAA 1035 0.4135 MEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTQFEEMTLNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRFNDQWLTMALMGGFARIGNNEITILVNDAEKSSDIDPQEAQQTLEIAEANLRKAESKRQTIEANLALRRARTRVEVITTNS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000278g0010 344 Gene3D - 162 213 IPR024034 -
Lele2000278g0010 344 PANTHER ATP SYNTHASE 1 212 - -
Lele2000278g0010 344 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 212 293 IPR036771 -
Lele2000278g0010 344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 164 IPR027417 -
Lele2000278g0010 344 Gene3D - 300 344 - -
Lele2000278g0010 344 Coils Coil 300 327 - -
Lele2000278g0010 344 Pfam ATP synthase, Delta/Epsilon chain, long alpha-helix domain 297 340 IPR020547 -
Lele2000278g0010 344 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 214 292 IPR020546 GO:0015986
Lele2000278g0010 344 Gene3D - 214 298 IPR036771 -
Lele2000278g0010 344 ProSitePatterns ATP synthase alpha and beta subunits signature. 150 159 IPR020003 GO:0005524
Lele2000278g0010 344 Hamap ATP synthase epsilon chain [atpC]. 212 339 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lele2000278g0010 344 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 12 159 IPR000194 GO:0005524
Lele2000278g0010 344 Gene3D - 1 161 IPR027417 -
Lele2000278g0010 344 CDD F1-ATPase_delta 214 334 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lele2000278g0010 344 FunFam ATP synthase epsilon chain, chloroplastic 212 298 - -
Lele2000278g0010 344 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 162 208 - -
Lele2000278g0010 344 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 213 340 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000278g0010 18 207 Primary Pumps ATPases(2) AT1G78900 29.756 2.84e-18 84.0