Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000278g0003 ATGCTTTGGAAGAAGCTTGTACAGTTTGGGAAGGGAGCAGCGGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAACTGCTCAGCAACAGTCGGACAAGTGGGGAATGTTGGGGTGAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCACCCCCATGGGGGTGGTGAAGGAAGGGCTCCAATTGGTAGAAAAAGACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGCCGCCGTAGTAAATAG 399 0.4687 MLWKKLVQFGKGAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRSK 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000278g0003 132 Pfam Ribosomal Proteins L2, C-terminal domain 13 107 IPR022669 GO:0003735|GO:0005840|GO:0006412
Lele2000278g0003 132 MobiDBLite consensus disorder prediction 116 132 - -
Lele2000278g0003 132 SMART Ribosomal_L2_C_2 7 109 IPR022669 GO:0003735|GO:0005840|GO:0006412
Lele2000278g0003 132 Gene3D Ribosomal protein L2, domain 3 53 131 IPR014726 -
Lele2000278g0003 132 FunFam 50S ribosomal protein L2 52 132 - -
Lele2000278g0003 132 ProSitePatterns Ribosomal protein L2 signature. 74 85 IPR022671 GO:0003735|GO:0005840|GO:0006412
Lele2000278g0003 132 Gene3D - 8 52 IPR014722 -
Lele2000278g0003 132 SUPERFAMILY Translation proteins SH3-like domain 13 129 IPR008991 -
Lele2000278g0003 132 PANTHER RIBOSOMAL PROTEIN L2 13 131 IPR002171 GO:0003735|GO:0005840|GO:0006412
Lele2000278g0003 132 MobiDBLite consensus disorder prediction 81 132 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000278g0003 13 91 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 44.444 2.93e-14 65.5