Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000126g0032 ATGATTCGTACGAATAACAGTGATTATGTTATTGAAACAAAAATGGAGGATGAGAGACTGCTGCCGATTGCGAATGTGGGGAGGATAATGAGGAAAATACTGCCAGGGCGTGCGAAGATCTCAAAAGAAGGGAAGCAGATAATGCAAGAATGTGTGACCGAGTTCATAAGCTTTGTGACAGAGGAAGCTTCTGACAAGTGTCACAAAGAGAATCGCAAGACCGTCAACGGGGATGACATCTGTTGGGCCCTAAGTGCTTTAGGGTTTGATAACTACGCTGAGGCCATTGCCAGGTACTTGCATAAATACAGGCAAGCTGAGAGGGACAAATTCACCAATAATCACAAAAGTAAAGATCATCATCAAAAGCAGCACTTGCTTAAAAACTCTTCTTCGGCCACAAAATCAGCAAGCTCCCTCCTCCAAAGCGACCAGCACCACCAAACTGAAGACAAGGCTCCTGCAACTAATCAATCTCCATGA 483 0.4451 MIRTNNSDYVIETKMEDERLLPIANVGRIMRKILPGRAKISKEGKQIMQECVTEFISFVTEEASDKCHKENRKTVNGDDICWALSALGFDNYAEAIARYLHKYRQAERDKFTNNHKSKDHHQKQHLLKNSSSATKSASSLLQSDQHHQTEDKAPATNQSP 160
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele2000126g0032 160 SUPERFAMILY Histone-fold 17 122 IPR009072 GO:0046982
Lele2000126g0032 160 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 12 142 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lele2000126g0032 160 MobiDBLite consensus disorder prediction 113 160 - -
Lele2000126g0032 160 Gene3D Histone, subunit A 9 157 IPR009072 GO:0046982
Lele2000126g0032 160 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 20 84 IPR003958 -
Lele2000126g0032 160 MobiDBLite consensus disorder prediction 127 144 - -
Lele2000126g0032 160 Coils Coil 89 109 - -
Lele2000126g0032 160 PRINTS CCAAT-binding transcription factor subunit A signature 67 85 - -
Lele2000126g0032 160 PRINTS CCAAT-binding transcription factor subunit A signature 48 66 - -
Lele2000126g0032 160 PRINTS CCAAT-binding transcription factor subunit A signature 86 104 - -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000126g0032 15 119 CCAAT-HAP3 Transcription Factor Family AT1G09030 71.698 2.33e-53 164
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele2000126g0032 CBFD_NFYB_HMF 3.2e-25 CL0012