Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000104g0063 ATGGAAGGAAGCAAAGAAGAGGAGGCTCATAAAGCAATAGAAATTGCTGAGCAGCGATTTGCTCAGAGAGACTTTGCTGGTGCAAAAAATTATGCATTGAAGGCCAAAACCCTGTGTCCAGGAATGGAGGGCATAGCTCAAATGGTGGCGACATTTGAAGTTTACATTGCTTCCGAGATTAAACATAATTCTGAAAGAGATTATTATTCAATTCTCGGATTAAAACCTTCAGCAGATGAAGGGAGCATCAAGAAACAGTACAGGAAGATGGCCGTGTTGCTTGACCCAGATAAGAACAAATGTGTAGGAGCTGATGGAGCGTTCGAACTTGTATCCGAAGCGTGGATATGGTTGTCAGATAATGCTAAGCGTAGTTCTTATGATCTCAAGAGAAATACACAACTATCCGCTGGGATTAATCAGACAAATTTGTCTTCAGTCCATGCTACGACAGGTTATACTCACAATAAATGCTCCAATTTTTCAACCTCCCATGGTAGGCTTGACACTTTCTGGACAATTTGCACTTCTTGTAATGTTCAGTATGAGTATCTACGCAAATATGTGAATAAGAGACTTTCATGCAAAAACTGCCGTGGCACTTTCATTGCTGTGGAAACCGGGGCAGCCCCAGCAAATGGTTCCTTCCCGTATGGTCCTTGGTCTTATACTCTGGGTAATAGTTATGGAAGCCATTCATTTGATGGAGTTACGTATGTCCCAACTAGAGCTCCCTATTTTAATGGAAATGGAGTTACTGGATACCATTCTGGACATGGATACGAGTATGTTCCAAATGTTTCATTTCAATGGAGTTCAACAGGACATGTTACTCAAAACGGATCAACTACATTATCTGCTGGTTCAGTATGTCAGGCCAATGGAAATGCAAAGAGAGGAAGACCAAAAATCAGATCAGGAGTTGATAGGAGTCACCATGTGGGAGAGACTGTTCTCAATATGAATCCAGATGTATCACATTCTTGTTATGCTCCGCAGGAAATTAAGCCCAGTAAACCTGATAAGAGAAGGAAAGTTGTCGTGGAAGCCGGCTCCAGAAATAACTATGAAGAAAATGACTTGAAAGTTGCTCCAGGGTCAAGATTGGCCAATAGAAATGAAAGCATTGGGCATGGCCCAAAGTTTTCCAGTACAAGTGAAGTTCAGTCTAAACAGTCTTCCATGGATTTGGTGTTTGACACCAGAAAAGCGTTGATTGAGAAGGCCAGAAGAGAAATTAGAAAGAAACTTGAAGAGATGAAGTTGAAATCTGAAACGGCTGCTGCAGTTGAGGGGAATGAAAAAGCAAAATCTGAAGTCATTCAAGAGAAAAAAGATACAAATGGTCGACCAAGTCTAAATTTTTCTGGTCTTCAACTAGAGCATAGGAAAACCGGTCCAGTCTCAATCACCGTCCCAGATTCTGATTTTCATGACTTTGATAAAGATAGGTTAGAGGAATGCTTCAAGCCAAAGCAAATATGGGCCTTGTATGATGAGGAGGATGGCATGCCTCGATTGTATTGTATCATCCGTGAGGTTATTTCTACCAATCCATTTAAGATTCATATTAGTTTTTTAAGCTCCAAAACTGATAGTGAGTTTGGCTCAGTGAATTGGCTAGATTCAGGTTTTACCAAATCTTGCGGAAATTTTAGGGCGTGGAGCTCAGATATTGTTGAGCATGTTAACATTTTTTCTCATGTTCTTAATCGTGAGAAGGCTGGTCGAGGTGGTTGTGTTCAGATATATCCTAGAATAGGAGATATTTGGGCTGTTTATCGAAATTGGTCACGGGAATGGAACAGAGGCACGCCAGATGAAGTGAGGCATCAGTATGAAATGGTGGAGGTTCTTGATGAATATTCCGAGGAGTTTGGGGTTTGTGTGACTCCCCTTGTGAAGTTAGATGGATTCAAAACAGTATATCAGAGGAATCCGGACAAAAGCGCCATTAGATGGATACCGAGAAGAGAAATGTTGCGCTTCTCGCACCAAGTGCCGTCATGGTTAGTCAAGGGAAAAGGAAGCAATTTGCCAGAAAGGTGTTGGGACCTGGATCCAGCTGCGACCCCAGATGGACTTCTTCATGCTGCAACTACTGAAGGAAACGGTTTGTAG 2121 0.4187 MEGSKEEEAHKAIEIAEQRFAQRDFAGAKNYALKAKTLCPGMEGIAQMVATFEVYIASEIKHNSERDYYSILGLKPSADEGSIKKQYRKMAVLLDPDKNKCVGADGAFELVSEAWIWLSDNAKRSSYDLKRNTQLSAGINQTNLSSVHATTGYTHNKCSNFSTSHGRLDTFWTICTSCNVQYEYLRKYVNKRLSCKNCRGTFIAVETGAAPANGSFPYGPWSYTLGNSYGSHSFDGVTYVPTRAPYFNGNGVTGYHSGHGYEYVPNVSFQWSSTGHVTQNGSTTLSAGSVCQANGNAKRGRPKIRSGVDRSHHVGETVLNMNPDVSHSCYAPQEIKPSKPDKRRKVVVEAGSRNNYEENDLKVAPGSRLANRNESIGHGPKFSSTSEVQSKQSSMDLVFDTRKALIEKARREIRKKLEEMKLKSETAAAVEGNEKAKSEVIQEKKDTNGRPSLNFSGLQLEHRKTGPVSITVPDSDFHDFDKDRLEECFKPKQIWALYDEEDGMPRLYCIIREVISTNPFKIHISFLSSKTDSEFGSVNWLDSGFTKSCGNFRAWSSDIVEHVNIFSHVLNREKAGRGGCVQIYPRIGDIWAVYRNWSREWNRGTPDEVRHQYEMVEVLDEYSEEFGVCVTPLVKLDGFKTVYQRNPDKSAIRWIPRREMLRFSHQVPSWLVKGKGSNLPERCWDLDPAATPDGLLHAATTEGNGL 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000104g0063 706 MobiDBLite consensus disorder prediction 434 455 - -
Lele2000104g0063 706 MobiDBLite consensus disorder prediction 336 351 - -
Lele2000104g0063 706 CDD DnaJ 67 120 IPR001623 -
Lele2000104g0063 706 SUPERFAMILY Chaperone J-domain 58 132 IPR036869 -
Lele2000104g0063 706 MobiDBLite consensus disorder prediction 328 389 - -
Lele2000104g0063 706 Coils Coil 403 426 - -
Lele2000104g0063 706 Pfam Domain of unknown function (DUF3444) 469 674 IPR024593 -
Lele2000104g0063 706 SMART dnaj_3 66 123 IPR001623 -
Lele2000104g0063 706 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lele2000104g0063 706 PANTHER BNAC03G44070D PROTEIN 1 692 - -
Lele2000104g0063 706 Pfam DnaJ domain 67 128 IPR001623 -
Lele2000104g0063 706 Gene3D DnaJ domain 56 151 IPR036869 -
Lele2000104g0063 706 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lele2000104g0063 706 PRINTS DnaJ domain signature 123 142 IPR001623 -
Lele2000104g0063 706 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lele2000104g0063 706 PRINTS DnaJ domain signature 87 102 IPR001623 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000104g0063 8 303 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.599 2.95e-31 124