Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000104g0024 ATGCTTCTATCTCCAGGCCACTCCCCTCGCCATATCTCTTCGCCCTCTCCTTCTCTTTCCCAAGTTTCTGTGCAAAATCCCAATGATTCATCCTCTGAAATCACTCCCAAGATCCCTCGCAAGAACCAAGCTGTCCTCGATGAGGACACGTACGTTGCCTCCATCGAGAAGATCATCGAGCGCGACTTCTTCCCTGATATCTCCAAGCTTAGGGATCGCCTTGACTGGCTCGAAGCAATCAAGACTGGCGATCCGGTTCAGATTCGTGATGCCCAGTTGAAGATCATGGAACGCCGTGGACGGAAGGTAAATAATTCTAACGCTGATGGTAGAACTCAAACGCCTGGTTCCACGTTTGCTAGAAATTTTAGTCCTTTTGATGAATTTGATGGTAAAACCCCTAGAACACCGGGTTTTATGAATGGGGAAGCTTCTGTTGGTGGTCATCCGAGTGAGGAAGATGGTATGGTGGATACATCACTTAGCCTGGATCAGTTTCTTAATAGGTATACGAGTGAGGACAATTGTAGTTTTTCTAAGATTTTGGAGAAAGTAAATAGGAAGAGGAAGGAGAGATTTGGGTACCTGACAGAAGGGGAGAAGGAACACGTTGCAGCTATTGAGGATGCAAAGAGGGATAGGATAACAGATGGATATGGGTCGTCATATCAGCCTCCAAGTACCTTAGAGGGGTGGAACTATACAGCAAAAAATCTGTTGATGTATCATCCAACTGATCGTGGGGAAGCCCCTCTGACAGAAGAGGAAAGGGCCGTAAGAATTAAAGGGTTGACAAAGGAGATTAATCGTTCAAATACAAGATTTCATGGTAAAATTATGGAATCTAGGCCTAATGACGATGGAACTGTTGAGGTGCTTTATACCCCTGTTGCTGGTGCAACTCCAGTTCCCACATCAGATAGAGAAGGTGATAAATTAAAGAAGTATGATTTGGAAGATTTGAGGAAGATTCCAAATCCTTTCTATGTTGAATCCGGAAAGAAAGCTGATAATGGTTATAGCTTTGTGAGGACACCATCTCCAGCTCCAGGAGTCACTGAATCCCCATTTATTACTTGGGGTGAAATTGAAGGGACCCCGTTGAGGTTGGATCCAGAGGATACGCCAATTGATATTGGTGGTAGTGCTGATGGACCTCATTATAAGATTCCTTCTGCACCTGCAAGAGATGAAAAGGCTCACTCGCTTTCTAGGGAGGCTGCACGTAAGCTGAGGGAAAGGTCAAAGAAGTTTCATAAGCCTCCGTTGCCATCACCAGTTAGAGGTGGAAGTGCTAGTCCAAGTGGTCGGACTCTTTCTCCTGCTGCCCAGAAGTTTGTGAGGAATGCTATTGCCAAATCCTCATCCTCTGTTGATGAAACACTACGTGCTAGTTACCGTGGTTCTAGTCCTGCTTTGAATACTCCTAGAAGTGTATCAAGGTTCGGTAGAGATGGGAGCGTGGGTTCTAGGTCTCCATCGCATTATGTTGATGTGGTTGAGCTACGCATTGAAATATTCGGCATTGAGCTTGTCTTTGCCACAAGTTTCTTCATTATTCTTAGTCCTTGGTTTCTTAGGTGCTTTCTGGTTCCATTATAATGTGAATATGAAAAGGATATATCAGTATGTGTATGGAATGAACAAGTCTATTCTTCAACACTAAGTTTGCTCCTAGGACGAGGCCAAAGGATCATACGAGTATTATGGGATTTGATTGTGTCTAAAGTACTTGAGATGTTGAAAATTGGTGATCTTGGACTGGCTGCAATAGTTGGAAAGAGTCACGCAGCTCATTCAATTATTGGTACCCCAGAATATATGGCTCCAGAGCTGTATGAGGAGGATTACACTGAGATGGTGGACATATACTCTTTTGGAATGTGTTTGCTTGAGATGGTCACAATGGAGATACCATACAGTGAATGTGACAGTATTGCCAAGATATACGAGAAGGTAACAACAGGAATAAAGCCGCAGGCTCTAAACAAAATCACTAACGCAGAGTTGAAGGCATTCATTGAGAAGTGA 2031 0.4392 MLLSPGHSPRHISSPSPSLSQVSVQNPNDSSSEITPKIPRKNQAVLDEDTYVASIEKIIERDFFPDISKLRDRLDWLEAIKTGDPVQIRDAQLKIMERRGRKVNNSNADGRTQTPGSTFARNFSPFDEFDGKTPRTPGFMNGEASVGGHPSEEDGMVDTSLSLDQFLNRYTSEDNCSFSKILEKVNRKRKERFGYLTEGEKEHVAAIEDAKRDRITDGYGSSYQPPSTLEGWNYTAKNLLMYHPTDRGEAPLTEEERAVRIKGLTKEINRSNTRFHGKIMESRPNDDGTVEVLYTPVAGATPVPTSDREGDKLKKYDLEDLRKIPNPFYVESGKKADNGYSFVRTPSPAPGVTESPFITWGEIEGTPLRLDPEDTPIDIGGSADGPHYKIPSAPARDEKAHSLSREAARKLRERSKKFHKPPLPSPVRGGSASPSGRTLSPAAQKFVRNAIAKSSSSVDETLRASYRGSSPALNTPRSVSRFGRDGSVGSRSPSHYVDVVELRIEIFGIELVFATSFFIILSPWFLRCFLVPLXCEYEKDISVCVWNEQVYSSTLSLLLGRGQRIIRVLWDLIVSKVLEMLKIGDLGLAAIVGKSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSIAKIYEKVTTGIKPQALNKITNAELKAFIEK 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000104g0024 676 SMART serkin_6 427 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000104g0024 676 SUPERFAMILY Protein kinase-like (PK-like) 579 675 IPR011009 -
Lele2000104g0024 676 MobiDBLite consensus disorder prediction 9 38 - -
Lele2000104g0024 676 MobiDBLite consensus disorder prediction 366 439 - -
Lele2000104g0024 676 MobiDBLite consensus disorder prediction 106 121 - -
Lele2000104g0024 676 Pfam Protein kinase domain 579 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000104g0024 676 ProSiteProfiles Protein kinase domain profile. 373 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000104g0024 676 PANTHER ES-2 PROTEIN - RELATED 4 493 IPR019148 -
Lele2000104g0024 676 Gene3D Transferase(Phosphotransferase) domain 1 567 676 - -
Lele2000104g0024 676 MobiDBLite consensus disorder prediction 391 411 - -
Lele2000104g0024 676 MobiDBLite consensus disorder prediction 1 43 - -
Lele2000104g0024 676 MobiDBLite consensus disorder prediction 103 157 - -
Lele2000104g0024 676 Pfam Nuclear protein Es2 43 446 IPR019148 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000104g0024 571 676 MAP Kinase Kinase Kinase AT5G55560 69.811 5.41e-47 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele2000104g0024 Es2 1e-96 No_clan