Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000104g0022 ATGATTTCCCCTGCTTCCTTAGGGTTTTTGGCCTTTATTTCAGCTCACAATTGGAGGGTTGATTCTTTTCTCAAGCTCCTTTATGTGCTTTTGAATAATTTGACTGGAATTGCTCTTGCTTTTCTCCTTTTTCAAAAAAAATTGAATCTTCCTGTTGATTTGTTGCGGCAGGAAGGGGAAAAGCCTCCACATTCTTTGCTTCTTTATCAATCCGTAGATCAACATCATATATATGTGCATCAAATGATGGATGAAGTAGAACTTGTTATAGTGGGAACACAGTCGATCTCCTCTTCATCTTCTGAGGAAGGCGATGGAGATGGTTTGACTGGAAAGTCAGACAAAAGTGCTGATGGCAATATTTCTTCTGATAAATTTCATCAGAGGTTGAGTTCTCAAAGCGATATTACTGTCTCACAAGAGACTTGTGATGATAAAATTGATTCATCCAACCCGGAGGGAGCAAGAAGAATTCCTTCTGTTGCAGCCGAGAAAGAAGTGCAGGATTCTGATGCTACACCTGATGCACTGCAATCAGATCAAGAAGGAACTGCATGTACCTCACCACTTCAGAGACCTTTGCAGAGTCCTGGTACTGATCAGCGTCCATTACAATCTAGTGAGGAAAGTCCCTCTATAATACGCGAAAAGAGTTCAAAAGACAGTGGAACTGAAATAGTAGTGTCGGATTCTGATGCTACTGCCAATGCACGGAAATCAGAGCAACTCACATTGTCTTCACTGCATGAGAAACCCTCGCAAAATCCTAGTACCATTCCACGTGCATTACATTGTGGTCAGGATGGTCCCTCCATAGCTCGTGAAAAAGTCTCAAAGGATGGATATAATTGGCGAAAATATGGCCAGAAACATGTTAAGGGCAATGAATATATAAGGAGCTATTACAAGTGCACACATCCCAACTGCCCAGCGAAGAAGCAATTGGAACAGTCAAATAATGGACAGATTACAGATACCATTTGCATTGGTCAGCATAATCATCCACCGGTGAACAGTTCACAACCTGTTGAAGAAAAATCAAACAATCCCTCTCTAGCTGACATGAAAGACAAAACATCCGTTGAACATGGATGTGTGCCTCAACAGATCAAGTCTCTAGAAACTCATCCAGTTTCAACAGTTTCCACAATTAATGAGGTCAAAGCTGCAACTTTACAGTCGATTAGAAGAAGGGATATGGTTCATCCTGAGTCAAAACGCCTGAAGAAAAACAATAGTAATGCTGATGGCCTTGGGGTTGAGAAGTCAGTTGGTGAATCTCGTCTTGTTGTTGAGACTTCAAGTGAGGTTGATTTTATTAATGATGGGTACCGTTGGCGCAAGTATGGGCAGAAACTAGTAAAAGGAAATCCAAATCCAAGAAGTTATTACCGGTGCTCAAGTCCTGGATGCCCCGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATCAAAAAATTGTGATAACCACCTATGAGGGACATCATGATCATGAAAGCCCCTCTGGAAGGACTGTTATTCACAACGGAGCAGCAGATACTTCCACAACAATCATCAACAGCGATTCGGGAAACAAATCTGGGGAAATCTCTGTTTGTGTTCATCCAGCAGAACAACAGATTTGCTTGTCCTTAGAAAGCAGGTCACAGGAGCAACGAAATGGTGAGCAAATTGCTAAACCAAAGACTTGCGATATGGATGAATCTCAAGGGACTGCTACTCGAGTCTCCGAAAGTACTAAAAGTGAGAAAGAACAAAATGGAAACGCGGGTACAGTAAATGATTCAGGTGGGCATGGCACCACATGCTATTCAGGTTCTGAGCCTCCATGTGGATTAAATAAACAGCAGAAAGATGAGGTAAGAACCATATCAGAAGAAAGTAAGTTAAACAAGGAATCTGAACCTGATGCAGAACCTTTCCAAAGCTAA 1929 0.4184 MISPASLGFLAFISAHNWRVDSFLKLLYVLLNNLTGIALAFLLFQKKLNLPVDLLRQEGEKPPHSLLLYQSVDQHHIYVHQMMDEVELVIVGTQSISSSSSEEGDGDGLTGKSDKSADGNISSDKFHQRLSSQSDITVSQETCDDKIDSSNPEGARRIPSVAAEKEVQDSDATPDALQSDQEGTACTSPLQRPLQSPGTDQRPLQSSEESPSIIREKSSKDSGTEIVVSDSDATANARKSEQLTLSSLHEKPSQNPSTIPRALHCGQDGPSIAREKVSKDGYNWRKYGQKHVKGNEYIRSYYKCTHPNCPAKKQLEQSNNGQITDTICIGQHNHPPVNSSQPVEEKSNNPSLADMKDKTSVEHGCVPQQIKSLETHPVSTVSTINEVKAATLQSIRRRDMVHPESKRLKKNNSNADGLGVEKSVGESRLVVETSSEVDFINDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERASHDQKIVITTYEGHHDHESPSGRTVIHNGAADTSTTIINSDSGNKSGEISVCVHPAEQQICLSLESRSQEQRNGEQIAKPKTCDMDESQGTATRVSESTKSEKEQNGNAGTVNDSGGHGTTCYSGSEPPCGLNKQQKDEVRTISEESKLNKESEPDAEPFQS 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000104g0022 642 MobiDBLite consensus disorder prediction 547 642 - -
Lele2000104g0022 642 MobiDBLite consensus disorder prediction 331 348 - -
Lele2000104g0022 642 MobiDBLite consensus disorder prediction 97 271 - -
Lele2000104g0022 642 FunFam WRKY transcription factor 57 426 500 - -
Lele2000104g0022 642 MobiDBLite consensus disorder prediction 566 611 - -
Lele2000104g0022 642 SMART WRKY_cls 278 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele2000104g0022 642 SMART WRKY_cls 440 499 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele2000104g0022 642 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 217 518 IPR044810 GO:0003700
Lele2000104g0022 642 MobiDBLite consensus disorder prediction 107 122 - -
Lele2000104g0022 642 Gene3D WRKY domain 271 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele2000104g0022 642 MobiDBLite consensus disorder prediction 331 352 - -
Lele2000104g0022 642 Gene3D WRKY domain 427 493 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele2000104g0022 642 Pfam WRKY DNA -binding domain 279 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele2000104g0022 642 Pfam WRKY DNA -binding domain 441 498 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele2000104g0022 642 ProSiteProfiles WRKY domain profile. 273 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele2000104g0022 642 MobiDBLite consensus disorder prediction 618 635 - -
Lele2000104g0022 642 SUPERFAMILY WRKY DNA-binding domain 433 500 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele2000104g0022 642 MobiDBLite consensus disorder prediction 224 261 - -
Lele2000104g0022 642 FunFam WRKY transcription factor 269 338 - -
Lele2000104g0022 642 MobiDBLite consensus disorder prediction 123 145 - -
Lele2000104g0022 642 MobiDBLite consensus disorder prediction 172 212 - -
Lele2000104g0022 642 SUPERFAMILY WRKY DNA-binding domain 275 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele2000104g0022 642 ProSiteProfiles WRKY domain profile. 435 500 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000104g0022 237 513 WRKY Transcription Factor Family AT2G04880 50.345 1.98e-82 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele2000104g0022 WRKY 2.4e-25 CL0274