Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000104g0021 ATGCAAGCATCAGAACATCATAGAAGTTCAAGTATGCACTATCAATTGATGCAACAAACTGAAGCCTACTGTTTACCTCAGTATCAAGCCTTAAATCATCAGCTATACGGCAGTGACATTAGAAGCCATGGAACCACCCACTTCTCTACTCCATGTTCTTCTGATCTCTATTGCACGTTGGAGTCCTCCTCTGCAACGGGAACTTTCAATGTTTATAACTCCCCTTCAACTGTGAGTTTCTCGCCTAATGGGAGCCCAATCTCGCAGCAAGATTCTAAATCATTCTCATACCCACCTGATCAACATCATTCTCCTGACAATACTTATAGCTCTCCAATGAGTGGGTCCTGTGTAACCGATGATTTGCATAGCAAATTGAAAGAGTTGGAAAGTGTAATGTTTGGCCCTGACTCTGATAATATTGATAGCTATGACAGCACCTTCAAGGACGGAATTAACAATCTTTGGCCTGAAATGGATGGCTGGAGGCAAACAATGGCAGCAATTTCTAGCAAGGACCTGACGCAGGTTCTAGTCACATGTGCAAAAGCAGTTGCGGATAATGATTTGTTAATGGCTCAATGTTTGATGGATGAGTTACGCCAAATGGTGTCGGTTTCTGGTGAACCAATTCAGAGGTTGGGAGCATATATGTTGGAAGGGCTTGTAGCTCGATTCTCTGCCTCTGGGAGTTCAATCTACAAAGCTTTAAGATGCAAAGAACCGGCAAGTGCTGAGCTTCTCTCATATATGCACATACTTTACGAGGTCTGCCCCTACTTCAAATTTGGTTACATGTCTGCAAATGGAGCCATTGCTGAAGCTATTAAATATGAAGACAGAGTTCATATTATTGATTTCCAAATTGCTCAGGGAAGCCAATGGATTACTTTGATTCAGGCTTTTGCTGCTAGACCTGGGGGGCCACCTCACATCCGAATTACAGGTATTGATGATTCGACATCAGCTTATGCCCGTGGAGGAGGACTAAACATAGTGGGAAAGAGACTATCGAAGTTGGCTGAGAAATTCAAGGTGCCATTTGAATTTCATGCTGCAGCTATCTCCGGCTGTGATGTTCAGCTGCATAATCTTGGGGTTCGACCAGGGGAGGCTCTGGCTGTGAATTTTGCGTTCATGCTACATCACATGCCCGATGAAAGTGTCAGCACTGAGAATCACAGGGATAGACTGCTGCGTTTGGTGAAGAGCCTGTCTCCGAAGGTGGTGACACTTGTTGAGCAAGAATCAAACACAAACACAGCACCATTCCTCCCTCGTTTCCTCGAAACTCTGGACTACTACAAAGCTATGTTTGAGTCAATTGACGTGACTCTTTCCAGAGATCACAAAGAGCGAATTAACGTGGAGCAGCATTGCTTGGCGAGAGACCTTGTTAACATCATAGCTTGTGAAGGAGTTGAGAGGGTGGAACGGCATGAGGTGCTGGGCAAGTGGAGGGCCAGATTTGCAATGGCTGGTTTCACACCTTACCCTTTGAGCTCATTGGTGAATAGCACCATCAAGAAACTGCTTGAGAATTATTCTGATAGATATACTCTTCAAGAAAGAGATGGAGCTCTCTATCTTGGTTGGATGAATAGAGATTTAGTTGCCTCTTGTGCGTGGAAGTGA 1635 0.4446 MQASEHHRSSSMHYQLMQQTEAYCLPQYQALNHQLYGSDIRSHGTTHFSTPCSSDLYCTLESSSATGTFNVYNSPSTVSFSPNGSPISQQDSKSFSYPPDQHHSPDNTYSSPMSGSCVTDDLHSKLKELESVMFGPDSDNIDSYDSTFKDGINNLWPEMDGWRQTMAAISSKDLTQVLVTCAKAVADNDLLMAQCLMDELRQMVSVSGEPIQRLGAYMLEGLVARFSASGSSIYKALRCKEPASAELLSYMHILYEVCPYFKFGYMSANGAIAEAIKYEDRVHIIDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLNIVGKRLSKLAEKFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFLPRFLETLDYYKAMFESIDVTLSRDHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRARFAMAGFTPYPLSSLVNSTIKKLLENYSDRYTLQERDGALYLGWMNRDLVASCAWK 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000104g0021 544 MobiDBLite consensus disorder prediction 80 114 - -
Lele2000104g0021 544 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 130 538 IPR005202 -
Lele2000104g0021 544 ProSiteProfiles GRAS family profile. 165 544 IPR005202 -
Lele2000104g0021 544 Pfam GRAS domain family 174 544 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000104g0021 80 544 GRAS Transcription Factor Family AT5G48150 71.074 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele2000104g0021 GRAS 2.7e-137 CL0063