Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000102g0144 ATGGCCAACACGTTACCTCCTGAAACGTCCTCACTTTCTGGGGAGGGTTCAAATATGGTAGGAGAAATCGCAGCCCAGGCATTATTATTAGCTCCTCTCCGGAGCTCCGTTGAGCTTAGCAACGATTCTTACGGACCCTTGCGAATATATAACTTAGGAGCTATGAATCTACAAGTATGTGTAATGGAGCGAATTATGTTTCAGCTCTGTGGACAACAAGGAAAAAAATGCACGACAACAACTGCAGGGATAGACTTGAGACATTTTGAACTGGAGAAAGAGAAAGAAGACGTTTCATCTCCTAGAGGAGTGTTAGAAGCCTGCATTAGTGACTTTGATTCTTCTCTTCAGTCATCCGAAATAGAGAGCCGTTGTTCAAGAGGTGGCTACTCTGAAGTTTACTGGGGTAGTCTCACAGACGGGAGTCTAGTAGCTATCAAGAGACTGACTAAAGGGACTCCATACGAGAGGACTGCAGGCTTTCTATCTGAGCTAGGCATTATTGCTCATGTTGACCATCCCAATATTGCAAAGCTTATTGGATGTGATGTAGGAGGAATGCACCTTGTCTTCCAACTTTCTCAGCTGGGAAGCTTAGGATCTCTCCTTCATGGTCCAAGTAAAAACGAGTTAGATTGGAGTAAAAGATATAAGATTGCTCTAGGCATGGCCAATGGTCTACTGTACCTTCATGAGAGTTGTCACGGGCGAATCATTCATAGGGATATTAAGTCAGACAATATCCTGCTCACTGAATGCTTTGAGCCACAGGCTGCAGTACTGCTAAGGGATGATGACTATGTGAGGGAGCCTACAAATACAAGCCGGAGGCGGTCTTTCCTTAGAACATACTCACAAGAGCTTCTGGATGTACAAGAATACAACTCAACCAAGTATCTAAATGATCTCAACAACACAGGAAGATTGCCCTTGGCTCTTGAGAGTTTTTGTTGTTAG 957 0.4399 MANTLPPETSSLSGEGSNMVGEIAAQALLLAPLRSSVELSNDSYGPLRIYNLGAMNLQVCVMERIMFQLCGQQGKKCTTTTAGIDLRHFELEKEKEDVSSPRGVLEACISDFDSSLQSSEIESRCSRGGYSEVYWGSLTDGSLVAIKRLTKGTPYERTAGFLSELGIIAHVDHPNIAKLIGCDVGGMHLVFQLSQLGSLGSLLHGPSKNELDWSKRYKIALGMANGLLYLHESCHGRIIHRDIKSDNILLTECFEPQAAVLLRDDDYVREPTNTSRRRSFLRTYSQELLDVQEYNSTKYLNDLNNTGRLPLALESFCC 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000102g0144 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Lele2000102g0144 318 PANTHER OS08G0249100 PROTEIN 126 257 - -
Lele2000102g0144 318 Gene3D Phosphorylase Kinase; domain 1 91 192 - -
Lele2000102g0144 318 Pfam Protein tyrosine and serine/threonine kinase 124 252 IPR001245 GO:0004672|GO:0006468
Lele2000102g0144 318 ProSiteProfiles Protein kinase domain profile. 119 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000102g0144 318 SUPERFAMILY Protein kinase-like (PK-like) 117 255 IPR011009 -
Lele2000102g0144 318 Gene3D Transferase(Phosphotransferase) domain 1 195 285 - -
Lele2000102g0144 318 SMART serkin_6 119 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000102g0144 105 259 Receptor kinase-like Gene Family AT1G53420 38.365 2.63e-29 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele2000102g0144 PK_Tyr_Ser-Thr 1.9e-19 CL0016