Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000102g0129 ATGATGGTTGCCGTGGGCAAAGGTTTGATGGCAATGGGTAGCGGCGAGGATGATGGAAGAGGCAACGAGCCTGTTCACCAATCACTCCCCAGACCCATAAACCCGCCACTGGACCTATCGATCCATTCGGGGATTGGTTTTTTGCTATCGTTGCTGCTGACTTTTCCTGAAAGTTCACTGCGAGTGGCTCTGAGGAAGAGCTGGGAGAAGATGGGCGCACCTAAGAAAAGTGGGGTTAAGGTTTCGGAGGAGGCCGAGGAATTGGCTCGCGTCCCTTTGCAAGCAATCCTCTTGGCTGATAGTTTTACTACCAAGTTCAGACCTATCACCCTTGAACGTCCCAAAGTTCTATTACCGCTTGTAAATGTTCCCATGATAAATTACACATTGGCGTGGCTTGAATCTGCTGGTGTCGAAGAGGTTTTTGTTTTCTGCTGTGCTCATGCTAAGCAAGTGACTTCCTATTTGAAGAAATCTGAGTGGCTCTCCCAACCAAATTTCACCGTCTCAATGATAGAGTCGCATCATACCGTTAGTGCTGGAGATGCTTTGCGCCTGATATATGAGCGCAATGTGATACATGGAGATTTTGTCCTGATCAGTGGAGATACGGTAAGCAACATGTCACTTACTCAGGCTCTTCAAGAGCACAAGGAAAGAAGAAAGAAAGATAACGATGCAATAATGACCATGGTCATTAAACGATCAAAACTTCATCCAGCCACTCATCAATCTCGACTTGGTACTGATGAACTTTTTATGGCCATTAATCCCGCTACCAATCAGCTTTTGTTCTATGAGGATAAGGCAGACTATTCTAAAGGGATTCTACATCTCGATAAATCCCTGCTTCTTGATAATCCTTCCATCTCTCTGCACTATGACAAGCAGGATTGTTATATTGATATCTGCTCACCGGAGGTTCTTAGCCTATTTACAGACAATTTTGACTACCAACATCTACGACGTCATTTCGTTAAGGGATTACTTGTTGATGATATTATGGGATACAAGATATTTACTCATGAAATTCACTCAAGTTATGCTGCAAGGATCGATAATTTCCGCAGCTATGACACTGTCAGCAAGGATATCATTCATAGATGGACATATCCATTGGTGCCAGATGTGAAGTTTTTTGGCAATTCCGCTACTAAACTTGAACGACGGGGAATGTATCGTGCATCAGAAATATCACAATCACATTCAGCAGTTGTTGGCCCATTTACAGTCATAGGATTTGGCACCAAAATTGGGGATAACACTACAATGTCAGATTCGGTTATTGGAGAAGGATGTACAATTGGCTCAAATGTTCAGATAGAGGGATCCTATATATGGGACAATGTCACCATTGAAGATGGTTGTAAACTTAGGCATGCCATTGTATGTGATGGGGTGACTATCAAGTCAGGAGCTGTTCTGGAACCTGGCGTGGTTCTATCTTTCAAGGGTGTAATTGGGCCAGACTTTGTTGTTCCTTCATACTCAAAAGTATCTTTATTTCAGCAGCCAATTGAGGAAGATAGTGATGAAGAGCTGGAATATGCTGACAGTACTGGTGCAATGAATAGCTTAGTGGATAGTGCAGAGGCTGCATCGCAGGTATTGGAGACACAATCCTTTTCTGCATCAGAGTTAGGTGTGGGTGGGGCTGGTTATGTTTGGTCAAAATGTGATGGAGGCCATGAAGAAGAATGGAGGCATTCAGTGGCTCCTATTCCCGCAGATAAAATTTCTGAGGCAATGAAAATTTTGGAGGAAGATCTGGATTTGGCTCATGATGGCAGTATTCTTCCTCTTTCTGGAGAGCTGAAACCTGATTCTAATGAATCAGACATTGATGATTCCAGAGATGACTCATACTTTGAGAAAGAGGTCGAAGCAACTTTTCTCAGGGCTGTGCATGAGAACATAAAAGAAGACCATGTGATTTTAGAAGTAAACTCTCTCAAGTTGTCATACAATAAGTTAGCAGCTGATTGTGCTGGAGCTATTTTCCATGCCATGATGAAATACGCTTTGGAGATCCCCCATAATTCAGCTGGTAGCTTGGTTCAGAACGTTGACAGTATACTAACAACCTGGAGAAAACTTCTAACGTCCTACCTTGCTGACATTGATGAGCAGATTGAAGTGATACTGAAGTTTGAAGAAATGTGCCTGGAATCTGCTAAAGAGTATGCTCCATTTTTCACAAAGATTTTGAGTATTATGTATGACAAAGATATCATAGAAGAAGATGCCGTTTTAAGTTGGGAAGACGAGAAGAGAGAGGCAGACGAGACAGATAAAACTTTTGTTAAGCAGGCCCAGACATTTATTCAATGGTTAAGAGAGGCTCCTGAAGAAGACGATGATGAGGAATAG 2370 0.4262 MMVAVGKGLMAMGSGEDDGRGNEPVHQSLPRPINPPLDLSIHSGIGFLLSLLLTFPESSLRVALRKSWEKMGAPKKSGVKVSEEAEELARVPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLAWLESAGVEEVFVFCCAHAKQVTSYLKKSEWLSQPNFTVSMIESHHTVSAGDALRLIYERNVIHGDFVLISGDTVSNMSLTQALQEHKERRKKDNDAIMTMVIKRSKLHPATHQSRLGTDELFMAINPATNQLLFYEDKADYSKGILHLDKSLLLDNPSISLHYDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFTHEIHSSYAARIDNFRSYDTVSKDIIHRWTYPLVPDVKFFGNSATKLERRGMYRASEISQSHSAVVGPFTVIGFGTKIGDNTTMSDSVIGEGCTIGSNVQIEGSYIWDNVTIEDGCKLRHAIVCDGVTIKSGAVLEPGVVLSFKGVIGPDFVVPSYSKVSLFQQPIEEDSDEELEYADSTGAMNSLVDSAEAASQVLETQSFSASELGVGGAGYVWSKCDGGHEEEWRHSVAPIPADKISEAMKILEEDLDLAHDGSILPLSGELKPDSNESDIDDSRDDSYFEKEVEATFLRAVHENIKEDHVILEVNSLKLSYNKLAADCAGAIFHAMMKYALEIPHNSAGSLVQNVDSILTTWRKLLTSYLADIDEQIEVILKFEEMCLESAKEYAPFFTKILSIMYDKDIIEEDAVLSWEDEKREADETDKTFVKQAQTFIQWLREAPEEDDDEE 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000102g0129 789 Pfam eIF4-gamma/eIF5/eIF2-epsilon 709 788 IPR003307 GO:0005515
Lele2000102g0129 789 FunFam Translation initiation factor eIF-2B subunit epsilon 82 373 - -
Lele2000102g0129 789 SUPERFAMILY Trimeric LpxA-like enzymes 338 497 IPR011004 -
Lele2000102g0129 789 FunFam Translation initiation factor eIF-2B epsilon subunit 613 789 - -
Lele2000102g0129 789 Gene3D - 612 789 - -
Lele2000102g0129 789 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 80 789 - -
Lele2000102g0129 789 SUPERFAMILY ARM repeat 623 781 IPR016024 -
Lele2000102g0129 789 CDD eIF-2B_epsilon_N 93 309 IPR035543 -
Lele2000102g0129 789 SMART 542_3 697 784 IPR003307 GO:0005515
Lele2000102g0129 789 Gene3D Hexapeptide repeat proteins 389 517 - -
Lele2000102g0129 789 SUPERFAMILY Nucleotide-diphospho-sugar transferases 91 439 IPR029044 -
Lele2000102g0129 789 ProSiteProfiles W2 domain profile. 617 788 IPR003307 GO:0005515
Lele2000102g0129 789 CDD LbH_eIF2B_epsilon 411 489 - -
Lele2000102g0129 789 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 79 373 IPR029044 -
Lele2000102g0129 789 CDD W2_eIF2B_epsilon 623 781 IPR044123 GO:0005085|GO:0031369
Lele2000102g0129 789 FunFam Trimeric LpxA-like enzyme 386 519 - -
Lele2000102g0129 789 Pfam Nucleotidyl transferase 95 232 IPR005835 GO:0009058|GO:0016779
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000102g0129 71 781 Eukaryotic Initiation Factors Gene Family AT2G34970 64.910 0.0 946