Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000102g0112 ATGAATGGTGTGGCACACCTTGAACCGGATTACTCTGAGTTCGTCGAAGTTGATCCTACTGGCAGATACGGCAGATACAATGAAATCCTCGGCAAAGGAGCTTCAAAGACAGTATATAGAGCATTTGATGAGTATCAAGGGATTGAAGTCGCATGGAACCAAGTCAAGCTGTATGATTTCCTGCAAAGCCCTGAAGCCCTTGAGAGGCTCTACTGTGAAATTCATCTTCTCAAAACACTGAAGCACAAAAACATTATGAAATTTTACACTTCTTGGGTTGACACAGCCAATAGAAATATCAACTTCGTCACTGAAATGTTTACTCCTGGTACTCTCAGACAGTATAGGCTAAAGCACAAGAGAGTAAACATCAGAGCAGTGAAGCATTGGTGTAGACAGATATTGAGAGGACTTCTGTATCTTCATAGCCACGACCCCCCTGTGATCCACAGAGATCTCAAATGCGACAACATTTTTATTAATGGAAACCAAGGGGAAGTAAAACTTGGGGATCTTGGCCTCGCAGCAATTCTCAAAAAATCTCACGCTGCTCATTGTGTCGGAACACCTGAGTTTATGGCCCCAGAAGTATATGAAGAGACGTATAATGAATTGGTTGATATATATTCCTTTGGAATGTGCATATTAGAGATGGTGACATTTGAATATCCTTATAGCGAATGCACTCATCCAATTCAAATCTACAAGAAAGTTATATCTGGGAAAAAACCAGATGCTTTGTATAAAGTTAAAGATCCAGAAGTGCGACAATTTGTTGAGAAATGCTTGGCAACAGTGTCTTTAAGGCTCTCGGCAAGGGAGCTTCTTGATGACCCGTTTCTCCAAATTGATGATAACTTTTATAATTCGGCACTAGTAGACAGTGGAGAATTTGATGACTTGGGTCCTTTTGTCCGGCATCCATTCTTAGATCTTCACCGAAGCTATAGCAATTTAAGTAGTGAATACTCAAATTATTATGGATCTGAAGCTCCAGGATGCTGGTATTCTCATCCAGGTGACACTGAACCAAGTGGAATTGAACTTTTCGAGCACCGTGATGATGATCCATCTGAAGATGTTGACATAAGCATCAAGGGCAGGAGGCAAGATGACGGTGGCATCTTTTTGAGACTAAGAATTGCAGATAAAGAAGGCCGTATCCGAAATATTCATTTCCCGTTCGACGTTGAGATGGACACAGCACTAACCGTGGCAACAGAAATGGTTGCAGAACTTGATATTACTGATCAAGATGTGACCAGAATAGCAGATATGATAGATGGGGAAATTTCTTCCTTGGTACCTGAATGGAGGCCGGGACCCGGGATTGAGGAGACTCCTCGTTTCGCAAACCAAAAGCACTGTCACAATTGCGCGTCGAATCACACATCAAGTGGCTCCTTTATGAATTTTCTGCCACATAATTCAGGGGCCAAGAACTCGCAACTCCTTCCGTGTGCTTCAATTCATGGGCGGTTTGAGGAGATTATGTTCCAGTCTGAGTATGAAGATCACGTTAGAGAAGACGCTCCAAACACATCAACCCAATCAGACTGCTTGCAGTATGAGGAGTTGTGGAAACAACATGAAAGTCGCGAGATCACTCCCGTAGATTCGGAACGTAGCCATTCTGATGAACAAAATGAACAAGTAGATAAACAAGCAGCAGCAGAAGATAAGGGACAGGTTGTTAGGGAAAATAGAATTGCACCCAGCTCAAGAAACTGTCTATCAAATCTATCAGGATTCCATTACTTATCTACAATTCGTTCACTCTGTGTTGACCTTGAGGACAAGTGTGGGAAAGAGATCCAACAGGAACTTAGATGGCTGAGAGCAATGTATCAAATGGAGCTAAGGGAACTCAGAGACCGGCAATTTGGGATGACAACAAAGTCCTGTCAAAGTAGTAACAGGAAGCACAACAAAGAATATGGCCTTATGTCATTGAACAGAGGCAACCATGGGATTCACTCGAAATCCTTCACTAACGATTGGAGTTGTGGTTCTCTTGTCGATACGAAGAGCCCCAATTCGGACGCCCGAAGGGCCCGAACTTGTGAGGCGATGGATTTCACTGGTGAAGAAGAAGGTGTGGTTAGTACAAAGAGTTTGTATGGAGGGTCATTGCTTCCTGTGTCTCTAGGCAGGACAGTGTCCCTCCCAGTCGATGCTGTTGATATATAA 2190 0.4306 MNGVAHLEPDYSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEALERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTPGTLRQYRLKHKRVNIRAVKHWCRQILRGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKLGDLGLAAILKKSHAAHCVGTPEFMAPEVYEETYNELVDIYSFGMCILEMVTFEYPYSECTHPIQIYKKVISGKKPDALYKVKDPEVRQFVEKCLATVSLRLSARELLDDPFLQIDDNFYNSALVDSGEFDDLGPFVRHPFLDLHRSYSNLSSEYSNYYGSEAPGCWYSHPGDTEPSGIELFEHRDDDPSEDVDISIKGRRQDDGGIFLRLRIADKEGRIRNIHFPFDVEMDTALTVATEMVAELDITDQDVTRIADMIDGEISSLVPEWRPGPGIEETPRFANQKHCHNCASNHTSSGSFMNFLPHNSGAKNSQLLPCASIHGRFEEIMFQSEYEDHVREDAPNTSTQSDCLQYEELWKQHESREITPVDSERSHSDEQNEQVDKQAAAEDKGQVVRENRIAPSSRNCLSNLSGFHYLSTIRSLCVDLEDKCGKEIQQELRWLRAMYQMELRELRDRQFGMTTKSCQSSNRKHNKEYGLMSLNRGNHGIHSKSFTNDWSCGSLVDTKSPNSDARRARTCEAMDFTGEEEGVVSTKSLYGGSLLPVSLGRTVSLPVDAVDI 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000102g0112 729 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000102g0112 729 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Lele2000102g0112 729 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000102g0112 729 CDD STKc_WNK 22 281 - -
Lele2000102g0112 729 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000102g0112 729 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 376 429 IPR024678 GO:0004674|GO:0005524
Lele2000102g0112 729 Gene3D Transferase(Phosphotransferase) domain 1 107 288 - -
Lele2000102g0112 729 SUPERFAMILY Protein kinase-like (PK-like) 18 282 IPR011009 -
Lele2000102g0112 729 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 641 - -
Lele2000102g0112 729 Gene3D - 373 441 - -
Lele2000102g0112 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Lele2000102g0112 729 MobiDBLite consensus disorder prediction 532 566 - -
Lele2000102g0112 729 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Lele2000102g0112 729 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000102g0112 1 497 MAP Kinase Kinase Kinase AT3G22420 57.222 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele2000102g0112 Pkinase 5.7e-49 CL0016