Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000102g0106 ATGTTCGATGGGGTCCCAGACCAGTTCCATCAATTCATAGAACCCACAACCTCATCAATCCCACTTCACCTATCTTTCCCTCTCAATGCCTTTCCTAACTTTGATCCTTATCACTTGCCCCTGCAACAACCCAATCTCTTGCTCCACCCACCTCCTCCTCCTCCCGACAAGCAAGATAACATCTTAAGCAGGGTATCCATGAATTTGGAGACTGGACAAGAAAGGCAATTACCTGAGCTCATCGATTCCTGCTGGACTCACGATGAAGTGCTTTCGCTATTCAGGATCAGATCTAGCATGGAAACCTGGTTCCCAGACCTCACCTGGGAGCATGTCTCGAGGAAGCTAGCAGAGCTTGGATTTAAAAGGAGTGCGGAGAAATGCAAGGATAAGTTTGAGAAGGAAAGTAGATGCTTGAACCACATTAATTACAATGAAAACTATCATTTTATTAGCGAGTTCGAACAAGAGCTTTATCAGGGTGAAGGAGATGATCATCAAGACCATGACCTGGAAGAAGAGGTTGCGAAAGAAGACAAGTCGAGCCAGCAGCTGGAAAAGCCAAGGAGGGACAAGACAAGACGTTGGACCACACATTGGAAGAGGGTTCTACGAGACATCACACATCAGCACCCCCCTTACCAAATGCTGCGTGGTGGAAAAATCAAAGGGCAGGAAGAGAAAGAAGCAAGATGGTAA 699 0.4649 MFDGVPDQFHQFIEPTTSSIPLHLSFPLNAFPNFDPYHLPLQQPNLLLHPPPPPPDKQDNILSRVSMNLETGQERQLPELIDSCWTHDEVLSLFRIRSSMETWFPDLTWEHVSRKLAELGFKRSAEKCKDKFEKESRCLNHINYNENYHFISEFEQELYQGEGDDHQDHDLEEEVAKEDKSSQQLEKPRRDKTRRWTTHWKRVLRDITHQHPPYQMLRGGKIKGQEEKEARW 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000102g0106 232 ProSiteProfiles Myb-like domain profile. 77 136 IPR001005 -
Lele2000102g0106 232 MobiDBLite consensus disorder prediction 211 232 - -
Lele2000102g0106 232 Pfam Myb/SANT-like DNA-binding domain 83 140 IPR044822 -
Lele2000102g0106 232 CDD GT1 83 134 - -
Lele2000102g0106 232 MobiDBLite consensus disorder prediction 173 193 - -
Lele2000102g0106 232 Gene3D - 85 137 - -
Lele2000102g0106 232 PANTHER FI21293P1 72 209 - -
Lele2000102g0106 232 MobiDBLite consensus disorder prediction 173 196 - -
Lele2000102g0106 232 FunFam Trihelix transcription factor GT-2 85 141 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000102g0106 85 155 Trihelix Transcription Factor Family AT1G33240 47.059 2.51e-14 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele2000102g0106 Myb_DNA-bind_4 3.4e-10 CL0123