Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000102g0103 ATGGAGCAGTATGAAATACTCGAGCAAATTGGAAAAGGGGCTTTTGGTTCTGCTCTTCTTGTGAGGCATAAGCACGAGAAGAAGAAATATGTTCTGAAGAAGATCCGACTGGCCCGCCAAACTGAGCGGTCTCGTAGATCTGCGCACCAGGAGATGGAGCTAATCTCTAAATTCAGAAATCCATTTATTGTGGAGCATAAAGATTCATGGGTAGAGAAGGGTTGCTATGTGTGTATTATTATAGGTTACTGTGAGGGTGGAGATATGGCGGAAGCTATAAAAAAGGCTAATGGCATTCTTTTTCCAGAGGAGAAACTTTGCAAGTGGCTTGTTCAACTTCTTATGGCACTTGACTACTTGCACACGAACCATATTCTTCATCGGGATGTCAAGTGTTCAAATATATTCTTGACGAAAGATCGAGACATACGCCTTGGTGATTTTGGACTTGCCAAAATGTTGACTTCAGATGATCTTGCTTCTTCTGTTGTGGGAACACCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATTCCTTATGGTTCTAAATCAGATATTTGGTCTTTGGGATGTTGTATATATGAAATGACAGCACATAAGCCTGCTTTTAAAGCATTTGATATACAAGCACTGATAAACAAGATTAACAAGTCCATAGTGGCCCCACTGCCAACAAAGTATTCTGGGCCATTTCGAGGTCTTGTTAAAAGCATGCTGCGGAAAAATCCAGAGCTTAGACCTAGCGTATGCCGCGGAGCTACTTGGGCACCCTCATCTTCAGCCTTATGTTCTCAAGATCCATCTTAA 807 0.4238 MEQYEILEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKFRNPFIVEHKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGILFPEEKLCKWLVQLLMALDYLHTNHILHRDVKCSNIFLTKDRDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTAHKPAFKAFDIQALINKINKSIVAPLPTKYSGPFRGLVKSMLRKNPELRPSVCRGATWAPSSSALCSQDPS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000102g0103 268 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Lele2000102g0103 268 Gene3D Transferase(Phosphotransferase) domain 1 84 260 - -
Lele2000102g0103 268 CDD STKc_Nek 3 249 - -
Lele2000102g0103 268 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele2000102g0103 268 ProSiteProfiles Protein kinase domain profile. 4 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000102g0103 268 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Lele2000102g0103 268 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 249 - -
Lele2000102g0103 268 SUPERFAMILY Protein kinase-like (PK-like) 1 249 IPR011009 -
Lele2000102g0103 268 PIRSF ILK 1 251 - -
Lele2000102g0103 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Lele2000102g0103 268 SMART serkin_6 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000102g0103 268 Pfam Protein kinase domain 4 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000102g0103 1 248 MAP Kinase Kinase Gene Family AT4G29810 31.008 2.90e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Lele2000102g0103 Pkinase 3.3e-61 CL0016