Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000102g0092 ATGGCCGAAGAAGCCAAGGCCAAAGGTAACGCCGCTTTTTCTTCCGGTGACTTCGACTCCGCCATCCGTCACTTCTCCGACGCCATCTCTCTCTCCCCCAATAACCATGTCCTCTACTCCAATCGATCGGCCGCTTATGCCTCCCTTTACAAATACTCTGAAGCTTTAACCGATGCCAAGAAGACCGTCGAGCTCAAGCCCGATTGGTCCAAGGGCTACGGCCGTCTCGGCGCCGCTCATCTTGGACTCGGCCAACACGACGACGCTATTGCTGCTTACAAGAAGGGCCTTGAAATTGACCCCAATAATGAACCACTTAAATCTGGTTTGGCTGATGCCCGGGCTAGGTCCCGTTCGACGCCGCCCATGGGTAATCCTTTCGGAGACGCTTTCTCTGGACCCGAGATGTGGGCGAGGCTCACTGCTGATCCCACCACTAGAGCATATCTGCAGCAACCTGATTTCGTAAAGATGATGCAGGACATTCAGAAAGATCCCAACAATCTGAACTTGTATATGAAAGACCAAAGAATCATGCAAGCCCTTGGTGTTTTGCTCAACCTCAAGATTCGCACCCCAAACGAGGACACTGATATGCCCGAGTCTTCCCCTTCGCCTCCGCCAGCAGAGAGGAAGAGAGCTGCTGAAGCTGACGCGGCGAAGGAAGAGAAGCGGCCCGGGCCCGAGCTCGAGCCCATGGATTTGACGGAGGGGGAGAAGGAAGCGAAGGATAGGAAAGCTCAAGCTCAGAGGGAGAAGGAAGCAGGCAATGCGGCTTACAAAAAGAAGGATTTTGATACGGCAATCCAGCACTACTCTAAGGCTATGGAATTGGATGATGAGGATATATCATATCTCACAAACCGTGCTGCTGTTTACTTGGAAATGGGACAGCTAGAAGAATGCATAAAAGATTGTGACAAGGCTGTAGAAAGGGGAAGAGAATTGAGATCAGACTTCAAGATGATAGCAAGAGCTTTGACAAGGAAGGGAACTGCCCTGGCAAAAATGGCAAAATGCTCAAAGGATTATGAACCTGCCATTGAGACTTTCCAAAAGGCACTTACAGAGCATCGCAACCCTGACACCTTGAAGAAATTGAATGATGTTGAAAAGGTTAAGAAAGAGCTTGAACAGCAAGAATACTTTGATCCAAAATTGGCTGATGAGGAGCGTGAAAAAGGTAATGATTTCTTTAAGCAACAAAATTATCCAGAAGCTGTGAGGCATTACACCGAGTCTTTAAGAAGGAATCCTAAGGATCCTAGGACATACAGTAACAGAGCTGCATGCTACACAAAACTTGGGGCAATGCCTGAGGGTTTGAAGGATGCGGACAAATGCATTGAGCTGGATCCAACTTTTGTAAAGGGTTATACTAGAAAAGGTGCTATACAGTTTTTCATGAAGGAACATGACAAAGCTTTGGAAACGTATCAGGAGGGGTTGAAACATGATTCAAACAACCAGGAGTTGCTTGATGGCATAAGAAGATGTGTAGAACAGATTAATAAGGCCAGCCGTGGAGATATAAGTCCTGAGGAGTTGAAGGAGAGACAGGCCAAGGCAATGCAGGACCCTGAGATACAGAACATCCTCCAGGACCCTATTATGAGACAGGTATTGGTTGATTTTCAGGAAAATCCCAAGGCTGCCCAGGAGCATACGAAGAATCCGATGGTGATGAACAAGATCCAGAAGTTGGTCAGTGCTGGAATTGTCCAGATTAGATAA 1734 0.4769 MAEEAKAKGNAAFSSGDFDSAIRHFSDAISLSPNNHVLYSNRSAAYASLYKYSEALTDAKKTVELKPDWSKGYGRLGAAHLGLGQHDDAIAAYKKGLEIDPNNEPLKSGLADARARSRSTPPMGNPFGDAFSGPEMWARLTADPTTRAYLQQPDFVKMMQDIQKDPNNLNLYMKDQRIMQALGVLLNLKIRTPNEDTDMPESSPSPPPAERKRAAEADAAKEEKRPGPELEPMDLTEGEKEAKDRKAQAQREKEAGNAAYKKKDFDTAIQHYSKAMELDDEDISYLTNRAAVYLEMGQLEECIKDCDKAVERGRELRSDFKMIARALTRKGTALAKMAKCSKDYEPAIETFQKALTEHRNPDTLKKLNDVEKVKKELEQQEYFDPKLADEEREKGNDFFKQQNYPEAVRHYTESLRRNPKDPRTYSNRAACYTKLGAMPEGLKDADKCIELDPTFVKGYTRKGAIQFFMKEHDKALETYQEGLKHDSNNQELLDGIRRCVEQINKASRGDISPEELKERQAKAMQDPEIQNILQDPIMRQVLVDFQENPKAAQEHTKNPMVMNKIQKLVSAGIVQIR 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000102g0092 577 SMART tpr_5 283 316 IPR019734 GO:0005515
Lele2000102g0092 577 SMART tpr_5 36 69 IPR019734 GO:0005515
Lele2000102g0092 577 SMART tpr_5 456 489 IPR019734 GO:0005515
Lele2000102g0092 577 SMART tpr_5 422 455 IPR019734 GO:0005515
Lele2000102g0092 577 SMART tpr_5 70 103 IPR019734 GO:0005515
Lele2000102g0092 577 SMART tpr_5 324 361 IPR019734 GO:0005515
Lele2000102g0092 577 SMART tpr_5 388 421 IPR019734 GO:0005515
Lele2000102g0092 577 SMART tpr_5 2 35 IPR019734 GO:0005515
Lele2000102g0092 577 SMART tpr_5 249 282 IPR019734 GO:0005515
Lele2000102g0092 577 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Lele2000102g0092 577 SMART CBM 526 565 IPR006636 -
Lele2000102g0092 577 SMART CBM 133 172 IPR006636 -
Lele2000102g0092 577 Coils Coil 239 259 - -
Lele2000102g0092 577 Pfam Tetratricopeptide repeat 8 35 IPR019734 GO:0005515
Lele2000102g0092 577 Gene3D Tetratricopeptide repeat domain 246 382 IPR011990 GO:0005515
Lele2000102g0092 577 Gene3D - 124 190 - -
Lele2000102g0092 577 Gene3D - 507 577 - -
Lele2000102g0092 577 ProSiteProfiles TPR repeat region circular profile. 70 103 - -
Lele2000102g0092 577 ProSiteProfiles TPR repeat profile. 249 282 IPR019734 GO:0005515
Lele2000102g0092 577 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Lele2000102g0092 577 FunFam Stress-induced phosphoprotein 1 246 380 - -
Lele2000102g0092 577 SUPERFAMILY TPR-like 248 376 IPR011990 GO:0005515
Lele2000102g0092 577 Coils Coil 360 380 - -
Lele2000102g0092 577 ProSiteProfiles TPR repeat profile. 388 421 IPR019734 GO:0005515
Lele2000102g0092 577 Gene3D Tetratricopeptide repeat domain 386 501 IPR011990 GO:0005515
Lele2000102g0092 577 Gene3D Tetratricopeptide repeat domain 1 116 IPR011990 GO:0005515
Lele2000102g0092 577 FunFam Stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing) 509 577 - -
Lele2000102g0092 577 FunFam hsp70-Hsp90 organizing protein 3-like 387 501 - -
Lele2000102g0092 577 Pfam TPR repeat 256 297 - -
Lele2000102g0092 577 Pfam TPR repeat 395 436 - -
Lele2000102g0092 577 PANTHER TPR REPEAT CONTAINING PROTEIN 2 549 IPR045248 -
Lele2000102g0092 577 Pfam Tetratricopeptide repeat 71 103 IPR001440 GO:0005515
Lele2000102g0092 577 Pfam STI1 domain 134 187 IPR041243 -
Lele2000102g0092 577 Pfam STI1 domain 518 569 IPR041243 -
Lele2000102g0092 577 MobiDBLite consensus disorder prediction 211 259 - -
Lele2000102g0092 577 SUPERFAMILY TPR-like 387 500 IPR011990 GO:0005515
Lele2000102g0092 577 SUPERFAMILY TPR-like 1 113 IPR011990 GO:0005515
Lele2000102g0092 577 ProSiteProfiles TPR repeat profile. 456 489 IPR019734 GO:0005515
Lele2000102g0092 577 FunFam Stress-induced phosphoprotein 1 1 116 - -
Lele2000102g0092 577 MobiDBLite consensus disorder prediction 192 259 - -
Lele2000102g0092 577 FunFam Putative stress-induced-phosphoprotein 1 123 191 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000102g0092 387 483 U-box Gene Family AT3G07370 28.866 1.24e-06 48.5