Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000102g0087 ATGACATGCCCTCTCTGTCATAAACTGTTGAAGGATGCTACTACCATCTCTCTCTGCCTTCATACGTTCTGCAGGAAATGCATATACGAGAGATTCTCAGATGAGGAGGCAGATTGCTGTCCAGTATGCAATATTGATCTGGGCTGTCTTCCGGTGGAAAAACTGAGGCCAGATCACAATTTGCAAGATATTAGAGCCAAAATATTCCCTTTGAGACGAAGAAAGATAAAGGCCCCAGAGGTGATACCTTCAGTACCTCTGCCAGCGAAAAGGAAGGAAAGATCACTTTCATCATTGGTGATTTCTGCTCCCAAAGTTTCAATGCAGACTGGCTTCACAGGAAAGAGAACGAAAACTGCTACAAGAAAGGCTGCTGCTTTGCGTGGATGCAGTTTTTCTGTTCATGAGTCCATAAAGAAGAAAGAAGTCTATACTGAGGATAACCTAGATTCTTCCACAGCTGAGCCTTCTAAGAAGAGTAGGCCTAATGAGGATACAGAGAACAATGTGGAACTTCCAGAAGGGAAAGTTGATCTCTGGACACCCTTGAACTGTCTTGTTGAAGAAGCCAACAGGACAAAATCCTCAAAGTTAACTTCACAAGGCTTGTCTCTTGCCAAATCCGAGCCTCCAACTACTCCCAATGGTGGACTAAGTATGCCTGAAATTACAGCCAAATCAGAGCCATCTGCTGCTGTCCATAGTGAATTACGTATGCCTAAAACCAAAAACAAGGATAATGGACATAAAACAAAATTTGGAGACGACAAGGATGAAAATGTTGTGCCTCTGGGACAAGTGAGGCGGAGAAGGGTGCGTCCTTCTGGTCAGAAAAGAGCTGCAGCATCCGAGAGTTCTACCTCAGCCCAAGTTATGCTAGATGCAGCTGGCGGCAGGTGTAACAGAGAAAACTGTCCTATTTGGTTTTCATTGGTTGCTTCAGAAGACCAGAAAGTAGATGTTCCCTTGCCGCAGATTTCAGCATGCTACTTAAGAATCAAGGACAGTAGTGTGCCGGTCTCCTTTATTAAGAAGTACCTTGTTAAGAAGCTTAATCTTGCCAGCGAAGCTGAGGTCGAGATAATGTGCGGTGGTCGACCCGTGCTGCCATCTCTGCAACTGCATAACTTGGTTGATCTCTGGTTCAGGACTGCGTCTTCCTCTAAAAAGATTCCTGCTTCTGTTGGCTCCTCCGCCAAGGACTTCGTTATGGTTTTATCATATTCTCGAAAGCCCCTCCCTCCTTAG 1248 0.4511 MTCPLCHKLLKDATTISLCLHTFCRKCIYERFSDEEADCCPVCNIDLGCLPVEKLRPDHNLQDIRAKIFPLRRRKIKAPEVIPSVPLPAKRKERSLSSLVISAPKVSMQTGFTGKRTKTATRKAAALRGCSFSVHESIKKKEVYTEDNLDSSTAEPSKKSRPNEDTENNVELPEGKVDLWTPLNCLVEEANRTKSSKLTSQGLSLAKSEPPTTPNGGLSMPEITAKSEPSAAVHSELRMPKTKNKDNGHKTKFGDDKDENVVPLGQVRRRRVRPSGQKRAAASESSTSAQVMLDAAGGRCNRENCPIWFSLVASEDQKVDVPLPQISACYLRIKDSSVPVSFIKKYLVKKLNLASEAEVEIMCGGRPVLPSLQLHNLVDLWFRTASSSKKIPASVGSSAKDFVMVLSYSRKPLPP 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000102g0087 415 ProSitePatterns Zinc finger RING-type signature. 19 28 IPR017907 -
Lele2000102g0087 415 SUPERFAMILY RING/U-box 2 68 - -
Lele2000102g0087 415 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 1 413 IPR044807 GO:0004842
Lele2000102g0087 415 ProSiteProfiles Zinc finger RING-type profile. 3 44 IPR001841 -
Lele2000102g0087 415 Pfam Zinc finger, C3HC4 type (RING finger) 3 43 - -
Lele2000102g0087 415 MobiDBLite consensus disorder prediction 191 261 - -
Lele2000102g0087 415 MobiDBLite consensus disorder prediction 238 261 - -
Lele2000102g0087 415 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 96 IPR013083 -
Lele2000102g0087 415 MobiDBLite consensus disorder prediction 143 175 - -
Lele2000102g0087 415 SMART ring_2 3 43 IPR001841 -
Lele2000102g0087 415 MobiDBLite consensus disorder prediction 191 220 - -
Lele2000102g0087 415 Gene3D - 288 392 - -
Lele2000102g0087 415 MobiDBLite consensus disorder prediction 143 172 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000102g0087 1 334 C3H Transcription Factor Family AT2G30580 42.450 3.91e-81 251