Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000102g0074 ATGGGTTATGGAACTTGTAATTATATTTCTCTCCGCCCTCCATCTTCTTCCTCTGTTCCCTGCTCTGCTCTGCAAAATGCTATACCTTTAAGTGGAAACAACTCACAGGAAAACGAAGACTCTCTTAAAATGCAGCCCTTCTTGTTGTTCCACTGTTTCATTGGCCTCTCTCTTGTTTTTGCTGAGGGAGCTCAATCTGCATTTAGTGATGAACTGTCAACACTTCTCTCAATCAAATCCAGTCTCGTTGATCCATTGAAGCATCTGAAGGATTGGCAGCCACCGACCAATCTGACCCGTGATGGTTCATGGTCACCCCACTGTAACTGGACCGGGGTTTGGTGCAACTCTAAAGGCTTCGTAGAGAGGCTCGACCTCTCCAACATGAACCTTAGTGGTCGTGTTTCAGACCACATTCAAGCACTTTCAAGTCTGTCTTTTTTCAACATAAGTTGCAACAATTTCGCTTCTTCATTGCCAAAATCACTGGCCAATCTCACTTCCTTGAAGAGCTTTGATGTGAGCCAGAACTACTTCACTGGCAGATTTCCTTCCGGTCTTGGGAGTGCCACGGGATTGAGATCAGTTAACGTGTCAAGTAATAACCTTTTGGGTTTTCTTCCCGAGGATCTTGGGAATGCAACGCTGCTGGAAAGCATTGATTTTCGTGGGGGATACCTTGAAGGTTCAATCCCCATTAGTTTCAAGAATTTACAGATGCTCAAATTTCTTGGGCTTTCAGGGAATAACTTTACAGGGAAGATTCCAGGAGAACTTGGAGAACTTACTTCTCTAGAGACACTAATTCTTGGGTACAATAAGTTTGAAGGGGTGGTCCCTTCAGAGTTTGGCAACCTCACCAATCTTCAGTACCTTGACTTAGCTGTGGGTAGTCTCAGTGGACAGATTCCACCACAATTGGGTAAGTTGAAAAAGCTTAATACCCTTTTTTTGTACAAGAACAAGTTTGAAGGAAAGGTTCCCCCTGAGATTGGCAACATTACGTCATTGGAGTATCTGGACCTGTCCGATAACGAGATTTCAGGGAAGATCCCAGAGGAAATTGCTGAGCTGGAGAACTTGCGGCTATTAAATGTAATGAGAAACAAACTAACAGGTTTGGTACCAGAAAAGCTTGGGGAGCTTAAGAAATTAAAAGTGCTTGAGCTATGGAAAAATTCCATACAAGGTCCTTTGCCGGCGAACCTTGGACAGAACTCTCCACTGGAGTGGTTGGACGTGTCTTCTAACTCATTATCAGGTGAAATTCCTCCAGGTTTGTGTGCTTCTGGAAATCTCACTAAACTGATACTTTTCAGTAATTCCTTCGCTGGTTCCATTCCAAGCGGGATTTCGAATTGTTCGTCTTTGGCACGTGTTCGCATTCATAACAATCTTCTTTCTGGGACTATTCCAATTGGTTTCGGAAAACTCCCAAACCTTCAAAGGCTGGAATTGGCTAAGAATAATCTCACCAGCCAAATTCCAATAGATATCGCTTCATCCACTTCACTTTCTTTCATTGATGTCTCTTGGAACCACCTTGAATCATCTCTACCGTCTGGGATTCTCTCCATTCCCACCCTTCAAATCTTCATTGCGTCCCACAACAACTTGGGAGGCAATGTACCAGGTGAGTTCCAGGACTGCTTGTCTCTCTCTCAGCTGGATCTTTCAAACAACCATATATCTGGAGCCATCCCAGAAAGCATTGCTTCTTGCCAGAAACTAGTCCATTTGAACCTCGGGAACAACCAGTTAACTGGGGAAATCCCGAAATCAATCGCAAACATGCCCACCTTAGCCACTCTTGATCTGTCCCACAATACACTTTCCGGCAGGATACCTGAAAACCTTGGCAACTCCCCGGCTCTTGAAACGATCAACCTATCCTACAACAAGCTCGAGGGTCCAGTGCCCTCCAATGGGGTTTTGATGACCATAAATCCTAATGATCTCACCAACAATGCCGATCTCTGCGGAGGCATTCTTCCTCCATGTTCTCTGAGCTCAACTCCGGTAAGCCCGCGAAGGAGCTCACACACAAAGCACATCATGATTGGTTTTATCACAGGAATATCAGTAATTGTGTCTCTGGGCATTGCATATATCGGCGGGAGATGGTTGTACAATAAATGGTACTCATACAACAGTTTCGTCCATGATTGGTTCAAGAACAGCAATGAAGAATGGCCTTGGAGACTAGTGGCATTCCAAAGGGTGAGTTTCACAAGCAGTGAGATTCTCGCTTGCATTAAGGAGCCAAACGTTATAGGCATGGGCGGCACTGGGATTGTGTATAAGGCCGAAATTCACAGACCTCATGTAACAGTAGCAGTGAAGAAACTATGGAGATCAGGGACGGACATAGAAGATGGGAATGATGTGTTGAAAGAAGTTAATCTGTTAGGGAGACTGAGGCACAGGAATATCGTGAGGCTTTTAGGGTACGTTCACAACGAAAGGGATGTGATGATGGTGTACGAGTTCATGCCCAATGGGAATCTTGGGACGGCACTTCATGGAGAGCAAGGAGAAAGGTTACTGATAGATTGGGTTTCAAGGTATAACGTAGCTGTTGGAGTTGCACATGGCCTCCATTACCTCCACCATGATTGTCACCCCGCAGTTATTCACAGAGACATCAAGTCTAACAATATACTCCTTGACGCAAATTTGGAGGCAAGGATTGCAGATTTCGGATTAGCAAAAATGCTGATCCATAAGAACGAGACTGTTTCAATGGTGGCCGGATCTTATGGGTATATCGCACCAGAATATGGATATACTCTGAAAGTGGACGAGAAAATCGACATATACAGTTACGGAGTAGTACTTCTGGAGCTCATAACAGGGAAAAAGCCTTTAGACCAGTCATTCGAAGAATGTGGAGACATAGTTGAATGGGTAAGAACGAAGAGAAGCAATGGAGTGTTGGAAGAAGCACTAGATCCGACCATAGCGGGAACGTGCAGGCATGTCCAGGAAGAGATGCTTCTTGTGCTCCGAATTGCACTTCTCTGTACGGCAAAGCTTCCAAAGGAAAGACCATCCATGAGGGACATAGTGACTATGCTGGGAGAGGCAAAACCCAGAAGAAAAAGCAGCTGTCAAAATTCAGTACACGACGAAACCAAGGAAAAGCCAATCTTCACCGCCTCTCCCATAAGACTTCTCTAG 3180 0.4487 MGYGTCNYISLRPPSSSSVPCSALQNAIPLSGNNSQENEDSLKMQPFLLFHCFIGLSLVFAEGAQSAFSDELSTLLSIKSSLVDPLKHLKDWQPPTNLTRDGSWSPHCNWTGVWCNSKGFVERLDLSNMNLSGRVSDHIQALSSLSFFNISCNNFASSLPKSLANLTSLKSFDVSQNYFTGRFPSGLGSATGLRSVNVSSNNLLGFLPEDLGNATLLESIDFRGGYLEGSIPISFKNLQMLKFLGLSGNNFTGKIPGELGELTSLETLILGYNKFEGVVPSEFGNLTNLQYLDLAVGSLSGQIPPQLGKLKKLNTLFLYKNKFEGKVPPEIGNITSLEYLDLSDNEISGKIPEEIAELENLRLLNVMRNKLTGLVPEKLGELKKLKVLELWKNSIQGPLPANLGQNSPLEWLDVSSNSLSGEIPPGLCASGNLTKLILFSNSFAGSIPSGISNCSSLARVRIHNNLLSGTIPIGFGKLPNLQRLELAKNNLTSQIPIDIASSTSLSFIDVSWNHLESSLPSGILSIPTLQIFIASHNNLGGNVPGEFQDCLSLSQLDLSNNHISGAIPESIASCQKLVHLNLGNNQLTGEIPKSIANMPTLATLDLSHNTLSGRIPENLGNSPALETINLSYNKLEGPVPSNGVLMTINPNDLTNNADLCGGILPPCSLSSTPVSPRRSSHTKHIMIGFITGISVIVSLGIAYIGGRWLYNKWYSYNSFVHDWFKNSNEEWPWRLVAFQRVSFTSSEILACIKEPNVIGMGGTGIVYKAEIHRPHVTVAVKKLWRSGTDIEDGNDVLKEVNLLGRLRHRNIVRLLGYVHNERDVMMVYEFMPNGNLGTALHGEQGERLLIDWVSRYNVAVGVAHGLHYLHHDCHPAVIHRDIKSNNILLDANLEARIADFGLAKMLIHKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELITGKKPLDQSFEECGDIVEWVRTKRSNGVLEEALDPTIAGTCRHVQEEMLLVLRIALLCTAKLPKERPSMRDIVTMLGEAKPRRKSSCQNSVHDETKEKPIFTASPIRLL 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000102g0074 1059 SMART serkin_6 752 1026 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000102g0074 1059 Pfam Protein kinase domain 756 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000102g0074 1059 SUPERFAMILY Protein kinase-like (PK-like) 748 1026 IPR011009 -
Lele2000102g0074 1059 Gene3D Phosphorylase Kinase; domain 1 752 834 - -
Lele2000102g0074 1059 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 68 225 - -
Lele2000102g0074 1059 Gene3D Transferase(Phosphotransferase) domain 1 835 1052 - -
Lele2000102g0074 1059 FunFam MDIS1-interacting receptor like kinase 1 752 834 - -
Lele2000102g0074 1059 ProSitePatterns Serine/Threonine protein kinases active-site signature. 877 889 IPR008271 GO:0004672|GO:0006468
Lele2000102g0074 1059 Gene3D Ribonuclease Inhibitor 193 284 IPR032675 -
Lele2000102g0074 1059 Gene3D Ribonuclease Inhibitor 285 377 IPR032675 -
Lele2000102g0074 1059 SMART LRR_typ_2 262 285 IPR003591 -
Lele2000102g0074 1059 SMART LRR_typ_2 382 406 IPR003591 -
Lele2000102g0074 1059 SMART LRR_typ_2 166 190 IPR003591 -
Lele2000102g0074 1059 SMART LRR_typ_2 334 358 IPR003591 -
Lele2000102g0074 1059 SMART LRR_typ_2 598 622 IPR003591 -
Lele2000102g0074 1059 SMART LRR_typ_2 478 502 IPR003591 -
Lele2000102g0074 1059 FunFam MDIS1-interacting receptor like kinase 1 835 1045 - -
Lele2000102g0074 1059 ProSitePatterns Protein kinases ATP-binding region signature. 758 782 IPR017441 GO:0005524
Lele2000102g0074 1059 ProSiteProfiles Protein kinase domain profile. 752 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000102g0074 1059 Pfam Leucine rich repeat 576 635 IPR001611 GO:0005515
Lele2000102g0074 1059 Pfam Leucine rich repeat 456 515 IPR001611 GO:0005515
Lele2000102g0074 1059 PRINTS Leucine-rich repeat signature 598 611 - -
Lele2000102g0074 1059 PRINTS Leucine-rich repeat signature 553 566 - -
Lele2000102g0074 1059 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 226 326 - -
Lele2000102g0074 1059 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 285 1026 - -
Lele2000102g0074 1059 Pfam Leucine rich repeat N-terminal domain 70 116 IPR013210 -
Lele2000102g0074 1059 Gene3D Ribonuclease Inhibitor 378 673 IPR032675 -
Lele2000102g0074 1059 SUPERFAMILY RNI-like 299 655 - -
Lele2000102g0074 1059 FunFam Leucine-rich repeat receptor protein kinase EMS1 327 409 - -
Lele2000102g0074 1059 ProSiteProfiles Leucine-rich repeat profile. 336 358 IPR001611 GO:0005515
Lele2000102g0074 1059 Gene3D Ribonuclease Inhibitor 70 192 IPR032675 -
Lele2000102g0074 1059 SUPERFAMILY L domain-like 106 396 - -
Lele2000102g0074 1059 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 410 671 - -
Lele2000102g0074 1059 Pfam Leucine Rich repeat 335 350 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000102g0074 47 1056 Receptor kinase-like Gene Family AT1G08590 62.840 0.0 1254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele2000102g0074 Pkinase 3e-46 CL0016