Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000102g0069 ATGAAACCTCCAGATTCTTTTTCCTCTACTGCACGAGACCTGACTGCAAATCCTGCCTCAGTACAGGCTGCTTCATCAAATTCCAACCTCAGAAGTGGTGGACACATGTTTTCATCACCTTCTAAATGCCTGAATGATATCTCTTTTTCCTCAATTTCGCAACATGATAGGAAGTATCAAGATTCTCCCTTCATTTCTAAGTCATTGAGAAGAGATGATGTGATGCCCCGGCTAGGAGCTTCCCTTACTCAGAGTGGGGAAGATGCGCCTTTCCCACCTTCACATTCTTCTCATCCAGAAATACATTCGGCAGCATTCATTTCTCAACCCCCGGAAAGTGATGATATTTCCTGGGGTCCAGATCCCTTTCAGAATATTCTTAATCTCTCTGTAAATGATTCCGGCCAGAATGATCAGATGGAAAATAGTTCTTGTTATATGTCTGATGACTACACCAAGAAAACTGATTTTGGGGAGTGGGTAGACCAGTTAATATCAGTTGATGAATCTGCTCATCCAAACTGGAGCCAGCTTCTTGTTGATGATAACGTACCAGATTCAAAATCAAAGGATGCCCCCGCCACCAAGCAGCAGCATGCACCATCTGGAGAAGTTAATGCTCCTCCTACTTCAGCGCCAAATGCACTACAAAGTAAGCCTAGAATGCGTTGGACTCCAGAACTTCATGAAGCTTTCGTGGAAGCAGTGAATAAGCTTGGTGGTAGTGAGAAGGCTACTCCAAAGGGTGTTTTGAACTTAATGAAAGTTGAGGGTCTTACTATCTATCACGTGAAAAGCCATCTGCAGAAGTATAGAACAGCCAGATTCAAACCCGAATCATCAGGAGGAGCTTCTGAGAAGAAGTCGACATCAGCCAAAGAAATGAAATCTTCAGATTTGACAGCTAGCATGGGGATTTCTGAAGCATTGCGGTTGCAGATGGAACTCCAGAAGCGGCTTCATGAACAACTTGAGATTCAAAGAAAGTTGCAGCTTCAAATAGAAAACCAAGGGAAGCATCTTCAGATGATGTTTGAGAAACAAAGAGAGATAGAGGACAGCAAGCACAAGACATCCTCCTCCTCCTCCTTGGACAGGACCACGGTATTAACTTCCCCCACAATTGAGGGTCAGGAAAAATCTGGAAGCAGCAATATCAATGCAACAACCATGGGCGAAGAATGTTCTGAGGATGCCTGCTCAAAACAAGAGGGGGAAGAAACTAAAGTTACTAGTGAAGAAGAGGTGGGGTATGATCAGCTGGATGCAGCAGCCTCCAAACGGGTGAAAAGTAGATAA 1299 0.4411 MKPPDSFSSTARDLTANPASVQAASSNSNLRSGGHMFSSPSKCLNDISFSSISQHDRKYQDSPFISKSLRRDDVMPRLGASLTQSGEDAPFPPSHSSHPEIHSAAFISQPPESDDISWGPDPFQNILNLSVNDSGQNDQMENSSCYMSDDYTKKTDFGEWVDQLISVDESAHPNWSQLLVDDNVPDSKSKDAPATKQQHAPSGEVNAPPTSAPNALQSKPRMRWTPELHEAFVEAVNKLGGSEKATPKGVLNLMKVEGLTIYHVKSHLQKYRTARFKPESSGGASEKKSTSAKEMKSSDLTASMGISEALRLQMELQKRLHEQLEIQRKLQLQIENQGKHLQMMFEKQREIEDSKHKTSSSSSLDRTTVLTSPTIEGQEKSGSSNINATTMGEECSEDACSKQEGEETKVTSEEEVGYDQLDAAASKRVKSR 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000102g0069 432 Gene3D - 218 277 - -
Lele2000102g0069 432 MobiDBLite consensus disorder prediction 60 74 - -
Lele2000102g0069 432 Pfam MYB-CC type transfactor, LHEQLE motif 305 350 IPR025756 -
Lele2000102g0069 432 MobiDBLite consensus disorder prediction 348 432 - -
Lele2000102g0069 432 Pfam Myb-like DNA-binding domain 221 272 IPR001005 -
Lele2000102g0069 432 MobiDBLite consensus disorder prediction 1 37 - -
Lele2000102g0069 432 MobiDBLite consensus disorder prediction 275 299 - -
Lele2000102g0069 432 MobiDBLite consensus disorder prediction 179 217 - -
Lele2000102g0069 432 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 216 276 IPR017930 -
Lele2000102g0069 432 MobiDBLite consensus disorder prediction 361 396 - -
Lele2000102g0069 432 MobiDBLite consensus disorder prediction 52 100 - -
Lele2000102g0069 432 FunFam Myb family transcription factor 218 276 - -
Lele2000102g0069 432 MobiDBLite consensus disorder prediction 194 217 - -
Lele2000102g0069 432 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 219 273 IPR006447 GO:0003677
Lele2000102g0069 432 SUPERFAMILY Homeodomain-like 217 273 IPR009057 -
Lele2000102g0069 432 Coils Coil 307 327 - -
Lele2000102g0069 432 MobiDBLite consensus disorder prediction 8 37 - -
Lele2000102g0069 432 MobiDBLite consensus disorder prediction 397 416 - -
Lele2000102g0069 432 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 215 402 IPR044848 GO:0003700
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000102g0069 14 364 G2-like Transcription Factor Family AT3G04450 43.360 4.99e-79 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele2000102g0069 Myb_DNA-binding 7.5e-09 CL0123