Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000102g0064 ATGTTTCCTGCGCCATGTCGTCAAATCAGAAATGGCATTGAACATGCGCGATGCCTTTTGAGGGGGAGAGCTACCATAGCACCCTCGCTGTCCAGTCTGCGAGTTCTTTATCTATCAAGCAAGTTATTGCAGAGCTGTGTTCTGACGATGACGAGGACTCCTTGTTGTGAGAAGATGGGACTGAAGAAGGGACCCAGGACTCCTGAAGAAGATCAGATTTTGATCTCTTATATTCAACGATATGGCCACGGAAACTGGCGGGCCCTTCCTAAACAGGCCGGTTTATTGAGGTGTGGAAAGAGTTGTAGGCTTCGGTGGATAAATTACTTGAGACCGGATATAAAACGAGGGAAATTCAGCAAGGAAGAAGAAGAAACCATCCTCAAGCTGCATCAAATTCTTGGGAATAGATGGTCTGCTATTGCGGCGAGATTACCGGGACGAACAGATAACGAAATAAAGAATTTTTGGCACACCCACCTTAAGAAGAGGCTTGAAAGATGCCAAGTGCTTAATGTAAGTGCGTTGTCCTCTTCAAGTAAAGGGGTGGTGATGCCGCCTGTGCCACAGTTAGTAGTAGCAGCGGAATCATCGAGTGCCGCTAATTATCTTGGTTTCACCGGCAAAGTTCTGACGAGTGCCAGTGAGGGTTTAGCGTCGAGGGAATATGCGGCAGCCGTGGATTCAGGATTCCATGCGGCGTCTGGGGAAACCCTAGGCGGCCATAGATCTAACAAGACCAGTGAAGAAATGGAATTTTGGTACGATCTATTCATGAAAGCCGGACACCCGACGCAAGGGCATGCAAATAATCTTGGATAA 822 0.4769 MFPAPCRQIRNGIEHARCLLRGRATIAPSLSSLRVLYLSSKLLQSCVLTMTRTPCCEKMGLKKGPRTPEEDQILISYIQRYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEETILKLHQILGNRWSAIAARLPGRTDNEIKNFWHTHLKKRLERCQVLNVSALSSSSKGVVMPPVPQLVVAAESSSAANYLGFTGKVLTSASEGLASREYAAAVDSGFHAASGETLGGHRSNKTSEEMEFWYDLFMKAGHPTQGHANNLG 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000102g0064 273 Gene3D - 118 165 - -
Lele2000102g0064 273 FunFam MYB-related transcription factor 62 115 - -
Lele2000102g0064 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 110 IPR017930 -
Lele2000102g0064 273 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 50 196 - -
Lele2000102g0064 273 SUPERFAMILY Homeodomain-like 60 157 IPR009057 -
Lele2000102g0064 273 CDD SANT 67 110 IPR001005 -
Lele2000102g0064 273 Pfam Myb-like DNA-binding domain 116 161 IPR001005 -
Lele2000102g0064 273 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Lele2000102g0064 273 ProSiteProfiles Myb-like domain profile. 58 110 IPR001005 -
Lele2000102g0064 273 SMART sant 62 112 IPR001005 -
Lele2000102g0064 273 SMART sant 115 163 IPR001005 -
Lele2000102g0064 273 CDD SANT 118 161 IPR001005 -
Lele2000102g0064 273 FunFam MYB transcription factor 118 165 - -
Lele2000102g0064 273 ProSiteProfiles Myb-like domain profile. 111 161 IPR001005 -
Lele2000102g0064 273 Gene3D - 63 115 - -
Lele2000102g0064 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 165 IPR017930 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000102g0064 50 258 MYB Transcription Factor Family AT2G31180 47.917 1.71e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele2000102g0064 Myb_DNA-binding 3.9e-16 CL0123