Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000102g0057 ATGGAGGAGATCCTTCTTAACAACCACTACCAATTGTGCGATGAGATCGGGCGGGGGCGATTCGGCACCATCTTCCGCTGCATTCACCTCCTCTCCGGTCACTACTATGCCTGCAAACTCATCGACAAGCGCCTCCTCTCCGATCCCACCGATCGCTCTTGCCTCCACAACGAGCCCAAATTCATGTCTCTCCTCTCTCCTCACCCCAACATTCTTCAGATCTTTCACGTCTTCCACCACGAACACTTTCTCTCCATCGTCCTCGAGCTCTGCCACCCCCACACCCTCCTCGACCGCCTCGTCGCTCGCCCCTTCCTGGAGACCGAAGCCGCTTCTATCATGAATCAACTCCTCCAGGCCCTCGCCCACTGCCACCGTCTCGGCGTAGCCCACAGAGACATCAAGCCCGACAATCTCTTGTTTGATTCCAGTACTAATCTCAAGGTCGCCGACTTTGGCTCCGCACAGTGGTTCGGCGACGGGAGCAGCATGAGTGGAGTGGTCGGGACGCCTTACTATGTGGCGCCGGAGGTATTACTCGGGAGAGACTACAATGAGAAAGTTGATGTGTGGAGTAGCGGTGTGATTTTGTACATAATGTTGGCCGGAGTTCCTCCCTTCCACGGGGAATCGCCGGCCGAGATATTTGAGGCTGTGATCAGGGCCAATCTGAGGTTCCCTTCCAGGATTTTCAGGTCCGTGTCTCCATCTGCCAAGGATCTCCTCAGGAAGATGATATGTAGGGATGTTTCAAGGAGATTATCGGCAGAGCAAGCCTTGGGGCATCCGTGGATCCAGAGTGGAGGAGAGAAAAAGGATCTGACGTGA 828 0.5507 MEEILLNNHYQLCDEIGRGRFGTIFRCIHLLSGHYYACKLIDKRLLSDPTDRSCLHNEPKFMSLLSPHPNILQIFHVFHHEHFLSIVLELCHPHTLLDRLVARPFLETEAASIMNQLLQALAHCHRLGVAHRDIKPDNLLFDSSTNLKVADFGSAQWFGDGSSMSGVVGTPYYVAPEVLLGRDYNEKVDVWSSGVILYIMLAGVPPFHGESPAEIFEAVIRANLRFPSRIFRSVSPSAKDLLRKMICRDVSRRLSAEQALGHPWIQSGGEKKDLT 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000102g0057 275 CDD STKc_CAMK 9 264 - -
Lele2000102g0057 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Lele2000102g0057 275 FunFam Phosphoenolpyruvate carboxylase kinase 2 2 275 - -
Lele2000102g0057 275 Gene3D Transferase(Phosphotransferase) domain 1 94 274 - -
Lele2000102g0057 275 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
Lele2000102g0057 275 SMART serkin_6 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000102g0057 275 SUPERFAMILY Protein kinase-like (PK-like) 5 267 IPR011009 -
Lele2000102g0057 275 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 271 - -
Lele2000102g0057 275 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Lele2000102g0057 275 Pfam Protein kinase domain 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000102g0057 275 ProSiteProfiles Protein kinase domain profile. 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000102g0057 10 273 EF-hand Containing Proteins AT3G20410 41.418 6.28e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele2000102g0057 Pkinase 1.6e-68 CL0016