Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000102g0055 ATGGACCAATCAGTTCTTGATGACATAATCAATCGTCTCCTTGAAGTCCGCGGTCGTCCGGGCAAGCAGGTTCAGTTGTCCGAGTCCGAGATCCGTCAGCTTTGCCTTGTTTCCAGAGATATTTTCCTACAACAGCCGAATTTATTGGAGCTTGAAGCACCCATAAAGATTTGTGGCGATGTACATGGTCAATATTCTGATCTTTTACGTCTCTTTGAGTATGGCGGATTACCTCCGCATGCCAACTATTTATTTTTAGGGGATTATGTGGACCGAGGGAAGCAGAGTTTGGAAACTATATGCCTTCTCCTTGCTTATAAAATAAAATATCCTGAGAACTTTTTCCTGTTGAGGGGGAACCATGAATGTGCTTCCATAAACCGTATATATGGATTTTATGATGAGTGTAAGAGAAGGTTCAATGTGAGGTTGTGGAAGGCATTTACTGAGTGCTTCAACTGCCTACCTGTGGCGGCCCTTATTGATGAAAAGATTCTGTGTATGCATGGGGGACTTTCTCCGGACTTGCATAATTTAGATCAGATCAGAAATCTACAGCGTCCAACTGATGTGCCAGATACAGGTTTGCTTTGTGACCTTCTTTGGTCAGACCCAAGCAAAGATGTTCAAGGTTGGGGAATGAATGACAGGGGAGTTTCATATACATTTGGTGCTGATAAGGTCTCTGAATTTCTTCAGAAACAAGATCTGGATCTTGTTTGTCGTGCTCATCAGGTTGTGGAGGATGGTTACGAGTTCTTTGCTGACCGACAGCTAGTAACAATATTTTCAGCACCTAATTATTGTGGAGAGTTTGACAATGCTGGTGCTATGATGAGTGTTGATGAGACACTAATGTGCTCGTTCCAAATATTAAAGCCAGCGGATAAAAAAACAAAGATCAATTTTGGAAGTAGTACAACAACTGCTAAGCCCGGAAATTCTCCAGCAGTCCTTACTGCGTACAAAAGTTTCAATTGA 981 0.422 MDQSVLDDIINRLLEVRGRPGKQVQLSESEIRQLCLVSRDIFLQQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGLPPHANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTECFNCLPVAALIDEKILCMHGGLSPDLHNLDQIRNLQRPTDVPDTGLLCDLLWSDPSKDVQGWGMNDRGVSYTFGADKVSEFLQKQDLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKTKINFGSSTTTAKPGNSPAVLTAYKSFN 326
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele2000102g0055 326 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Lele2000102g0055 326 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Lele2000102g0055 326 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Lele2000102g0055 326 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Lele2000102g0055 326 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Lele2000102g0055 326 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Lele2000102g0055 326 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Lele2000102g0055 326 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Lele2000102g0055 326 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Lele2000102g0055 326 FunFam Serine/threonine-protein phosphatase 52 305 - -
Lele2000102g0055 326 Gene3D - 1 305 IPR029052 -
Lele2000102g0055 326 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 300 - -
Lele2000102g0055 326 SMART pp2a_7 26 296 IPR006186 GO:0016787
Lele2000102g0055 326 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Lele2000102g0055 326 CDD MPP_PP1_PPKL 5 294 - -
Lele2000102g0055 326 SUPERFAMILY Metallo-dependent phosphatases 17 299 IPR029052 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000102g0055 33 242 Calmodulin-binding Proteins AT5G63870 30.677 9.66e-28 108