Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000102g0036 ATGTGGGGGATGGAAGAGAGCAAAGTGTTTACGGATGGAATGGGAACCATAGGGTATATGGATCCAGAGTACATGAGCAATGCCAAGTTAACATGTGCCAGCGACGTCTATAGTTTTGGAATAGTTGCACTGCAAATTCTATCGGGTCAGAAGGTGATAGAGTTAGATCTCGATGCCAGAGATCAACTCACTGGGAAGGCGAGAGACGTGAGCATGGGAAAGCGGTCAATATCGGATTTTGAAGACCCGAGGCTGAAGGAACAGGAGAAGGCTAGGATTACAAGGTTTGATGAGGGGACTGTGGTCACTTTGCAGTTTTCACGATCACGTACGTTTTGCCGATCCTTCCTTTGGCCACATACACCCTCAAAGTGA 375 0.4747 MWGMEESKVFTDGMGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTGKARDVSMGKRSISDFEDPRLKEQEKARITRFDEGTVVTLQFSRSRTFCRSFLWPHTPSK 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000102g0036 124 PANTHER OS01G0253100 PROTEIN 7 90 IPR045271 -
Lele2000102g0036 124 SUPERFAMILY Protein kinase-like (PK-like) 9 58 IPR011009 -
Lele2000102g0036 124 Pfam Protein tyrosine and serine/threonine kinase 11 51 IPR001245 GO:0004672|GO:0006468
Lele2000102g0036 124 Gene3D Transferase(Phosphotransferase) domain 1 2 107 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000102g0036 6 87 Receptor kinase-like Gene Family AT5G02070 39.024 3.40e-14 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Lele2000102g0036 PK_Tyr_Ser-Thr 6.1e-06 CL0016