Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000102g0035 ATGAAAATAGCGTCGGGAGCAGCGAGCGGACTGGAGTATTTGCATGACAAGGCCAATCCACCAGTTGTTTACAGGGACTTGAAATCCTCGAATATCTTGCTGGATGACAATCTCAACCCCAAGCTCTCTGATTTTGGGCTCAACAAGCTTTCCGGGGGAGATCGGTCAAATCTTATATCCCCCGGAGTTACGGGTACTTATGGCTACTCCGCTCCCGAGTATACAAGGACCGGACACCTCACCTTGAAATCAGACGTCTACGGTTTTGGAGTCGTGCTGCTCGAGCTCATCACCGGACGACGAGCCATTGATACTACCAAACCCAATGAGGAGCAAAATCTAGTTTCATGGGCACAACCCTTATTCAGAAATCCAAAACAATTCCCAGAAATGGCGGATCCTCTGCTGAAGAAGCATTTCCCGGAAAAGGATCTAAATCAAGCGGTGGCAGTGGCCGCCATGTGCCTCCAGGAGGAAGAAGGGGCGAGGCCTTTGATGAGTGATGTGGTAACTACTCTGAGTTTCCTGTCCATGGTTCCACCGGAGGTAATTCCGGCATCGGCGTCGCCGGCCACCTTGCCCCCGCAGGATGATGGTTCCGACGAGGAGGAGGAGGAGGAAGAGGAGCAGGATTCTGATGGGACGGGAGGCGAATCAAGCCGAAGCAGCAGTGCGAGTTGGGAAGAGGGAAGCGTGACATCCAGCAAGAAATCGCGAGATTTAAGCAAGAAGAAAAGTAGCTCCAGAGATTTAAAGCAGAAGAGCAGCAAGAAGGGTGGAGGAAAAGTGTCGAGCAGAAAGAGCAGTAGAAAATCATCGAGAAGCAGGAAGATGAGCATGGAATCGGAGGAAGGAGGAGGAGAGGGAATGCACGAGAGAGGGAGCAGCAGGATGTCGTTTAGTGAAAGCATGAGCAGCAGCAGCGGTGCAGACAGCGACAGGGGCTCACCGGAAGGGGCCAAGCAGAGGCTGCAGCACGCCCATACGGCAAAACAACGTCCCAAGGATCCCCGTAGGGAACGACTCGCGGCTTCTAGTGCAAGAGTATAA 1050 0.5286 MKIASGAASGLEYLHDKANPPVVYRDLKSSNILLDDNLNPKLSDFGLNKLSGGDRSNLISPGVTGTYGYSAPEYTRTGHLTLKSDVYGFGVVLLELITGRRAIDTTKPNEEQNLVSWAQPLFRNPKQFPEMADPLLKKHFPEKDLNQAVAVAAMCLQEEEGARPLMSDVVTTLSFLSMVPPEVIPASASPATLPPQDDGSDEEEEEEEEQDSDGTGGESSRSSSASWEEGSVTSSKKSRDLSKKKSSSRDLKQKSSKKGGGKVSSRKSSRKSSRSRKMSMESEEGGGEGMHERGSSRMSFSESMSSSSGADSDRGSPEGAKQRLQHAHTAKQRPKDPRRERLAASSARV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000102g0035 349 MobiDBLite consensus disorder prediction 216 232 - -
Lele2000102g0035 349 MobiDBLite consensus disorder prediction 316 349 - -
Lele2000102g0035 349 MobiDBLite consensus disorder prediction 197 213 - -
Lele2000102g0035 349 SUPERFAMILY Protein kinase-like (PK-like) 2 178 IPR011009 -
Lele2000102g0035 349 MobiDBLite consensus disorder prediction 185 349 - -
Lele2000102g0035 349 Gene3D Transferase(Phosphotransferase) domain 1 1 179 - -
Lele2000102g0035 349 SMART serkin_6 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000102g0035 349 MobiDBLite consensus disorder prediction 296 313 - -
Lele2000102g0035 349 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000102g0035 349 Pfam Protein kinase domain 3 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000102g0035 349 PANTHER OS07G0668900 PROTEIN 1 180 - -
Lele2000102g0035 349 MobiDBLite consensus disorder prediction 233 257 - -
Lele2000102g0035 349 FunFam Serine/threonine-protein kinase PBS1 1 188 - -
Lele2000102g0035 349 MobiDBLite consensus disorder prediction 259 273 - -
Lele2000102g0035 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
Lele2000102g0035 349 MobiDBLite consensus disorder prediction 274 291 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000102g0035 1 240 Glycoside Hydrolase AT3G07070 59.336 2.38e-88 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele2000102g0035 Pkinase 8.7e-24 CL0016