Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000102g0028 ATGGTAGAGGCCGCAGAGTTTCAGGGCTTTCTTGGATCGCCGGATAAACGGAGCCTCGCCGAGAGAAGGGGCTTCAGCTCCGATGCCGCCAGAATCAGTACGCCCCGCTTTCGCACCACTAGCCCATGGGCTTCTCCGGCAGCTCGTTCCCCCTGCGTCACTATACCCCCCGGTATTAGTCCCACCGCCTTGCTTGACTCTCCCATCATGCTTCCTAATTCTCAGGCTATGCCATCTCCCACCACTGGAACTTTTCTGCTGCCTCCTCCCACTCACCAAGGATCACTTCTCACTTCCGGCCTCGCTTCCTCTTCCAAATTCGAGCCCCAAATCAATTCCGATCCTCTTCCTTCCTCCTCTGTTTCAGAAATTCAGGTTTCTAACCATTGCATTATAGAAAAGGGAGGAATTTCAGATTGCCGGCCACTTGTGCCTTATCAAGCACCACTTGATTTTTCAATTCCGGCAGAGTTTCCAAAAGTACATAAAATGAAAAGAGAAGTACATTCTTATGATGATGTGAGAATTATGCAAGATGCAATTTATAACGCTAACAATCTTGAGATGCAAATGCATCGTTCTGAGGAAGTTGCTGATAAAGGCTTTCTACCCAAAAAGGCTAACAAGGATACTGGACAGCATAGTCTTGTAGAAGAAAATAAGAGAGAGACATCCTATTTGATGGGAATGGTAAGGACCTCAGAGGATGGATACCATTGGAGAAAATATGGACAGAAGCAGGTTAAAGGTAGTGAATATCCTAGAAGCTATTATAAATGCACCCATCCTAACTGTCAGGTCAAGAAAAAGGTGGAACGATCTCTTGATGGTCAAATAACTGAAATTATCTACAAGGGTACTCATAATCATGGGAAACCTCAACCTAGTCGCCGACCATCACTGGGATCAGCACTTTCTACTGATGAGATGTTAGACGCGGGTGAAGGTGGTGGAACCTTTATTAAAGCTGACGGTGGTTGGAGAAATGTTCATTCAGGGGTGAAGGATATAAAACAAAATTTGGATTGGAAGGCTGATAATCAGGAAAGGACATCATCATCTTCTGTTGTAACCGAACTCTCAGATCTCGTATCAACTAACAAGGGCAAACCTATCAGTATGTTTGAGTCAGAGGACACCCGGGAGCTTTCTTCTACACTTGCTAGTAAAGATGATGATGAAGATGTAGCAACTCAAGGAAGCTTATCACTTGAAGGAGATGCAAATGATGAAGAACCTGACTCAAAAAGAAGGAAGAAAGAGAGCTGCTTGATTGAAGCAAACTTTGCTTCTAGGGCTGTCCGTGAGCCGAGGATAGTAGTCCAAATTGAGAGTGAAGTAGACATACTTGATGATGGTTATCGTTGGCGAAAGTATGGACAGAAAGTTGTCAAAGGAAATCCAAACCCTAGGAGCTACTACAAGTGCACAAGTGCTGGATGCCTTGTGAGGAAACATGTGGAAAGGGCCTCACACAATCTAAAATACGTATTCACGACTTATGACGGGAAACACAACCATGAAGTGCCCACCGCTAGAAGCAACAATCAAATGAGCTCGACTGGTGCCTGTGCATTACCAAAGCCAGAAAGTCAAGTTCAAAACACGGCACCTCATTTTGATAGGAAGCCTGAATTTAGCAGTTTTATGGGAGGTTTTGGCGATGCGATGAAATTCGGGTCTACTTCCATATACCCTAAAACCTTGCCTTATGGCTCTTATGATACCGTGTTCCCCGACTTTCCCATTTCACTACCCTTGAATCTTCCCTCATCGGCTGGATTCAATCTCAATTGTGTAACACCTATGGGTTTCCTGAGGCCTAAACAGGAGCAGAAAGATGCTAGTATTATCTATGATCATACAATTACTTCCCTCACTCCATCCTCAGCATCATCCACGTCAGGGAAAAAAGAAAAAGAAAACCCAAGTCGCAAAGAGCTTTATAACACGGAAGCCTTAGCAGCAGTAAAGTTAAAATGCAAAGGTGGAATAACAAGAGAGAAGTAA 2010 0.4433 MVEAAEFQGFLGSPDKRSLAERRGFSSDAARISTPRFRTTSPWASPAARSPCVTIPPGISPTALLDSPIMLPNSQAMPSPTTGTFLLPPPTHQGSLLTSGLASSSKFEPQINSDPLPSSSVSEIQVSNHCIIEKGGISDCRPLVPYQAPLDFSIPAEFPKVHKMKREVHSYDDVRIMQDAIYNANNLEMQMHRSEEVADKGFLPKKANKDTGQHSLVEENKRETSYLMGMVRTSEDGYHWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSLDGQITEIIYKGTHNHGKPQPSRRPSLGSALSTDEMLDAGEGGGTFIKADGGWRNVHSGVKDIKQNLDWKADNQERTSSSSVVTELSDLVSTNKGKPISMFESEDTRELSSTLASKDDDEDVATQGSLSLEGDANDEEPDSKRRKKESCLIEANFASRAVREPRIVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCLVRKHVERASHNLKYVFTTYDGKHNHEVPTARSNNQMSSTGACALPKPESQVQNTAPHFDRKPEFSSFMGGFGDAMKFGSTSIYPKTLPYGSYDTVFPDFPISLPLNLPSSAGFNLNCVTPMGFLRPKQEQKDASIIYDHTITSLTPSSASSTSGKKEKENPSRKELYNTEALAAVKLKCKGGITREK 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000102g0028 669 SMART WRKY_cls 234 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele2000102g0028 669 SMART WRKY_cls 450 509 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele2000102g0028 669 Gene3D WRKY domain 224 294 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele2000102g0028 669 FunFam WRKY transcription factor 220 294 - -
Lele2000102g0028 669 ProSiteProfiles WRKY domain profile. 229 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele2000102g0028 669 MobiDBLite consensus disorder prediction 285 310 - -
Lele2000102g0028 669 SUPERFAMILY WRKY DNA-binding domain 443 510 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele2000102g0028 669 MobiDBLite consensus disorder prediction 383 397 - -
Lele2000102g0028 669 Pfam WRKY DNA -binding domain 235 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele2000102g0028 669 Pfam WRKY DNA -binding domain 451 508 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele2000102g0028 669 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 149 527 IPR044810 GO:0003700
Lele2000102g0028 669 FunFam WRKY transcription factor 57 436 510 - -
Lele2000102g0028 669 ProSiteProfiles WRKY domain profile. 445 510 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele2000102g0028 669 MobiDBLite consensus disorder prediction 627 647 - -
Lele2000102g0028 669 Gene3D WRKY domain 437 503 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele2000102g0028 669 SUPERFAMILY WRKY DNA-binding domain 231 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele2000102g0028 669 MobiDBLite consensus disorder prediction 369 420 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000102g0028 451 521 WRKY Transcription Factor Family AT5G56270 52.055 1.41e-13 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele2000102g0028 WRKY 4.8e-23 CL0274