Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000093g0080 ATGGATAGCAAACCTCCTCCTTCATCCTTGCCCCAACAAGAACAATCTTCTGCTTCTTCTGCTTCTTCGCCTCCTGTTCTGCAAGTGCCTTCGTCTCATGAGTCGTCTTCTTCTCCAAGGACGGTGAGATCGCCGGGTGGCTCGTTGTCATCGGGTCAGCATACCAGCAGGAGGCACGCCACGTTCCGGGGAATCCGGAGCCGAAGTGCTAAATGGGTGTCCGAGATACGGGAGCCACGTAAAACCACGCGCATTTGGCTGGGGACGTATCCCACCCCGGAGATGGCTGCCGCCGCGTATGACGTGGCTGCTCTTGCATTGAAAGGGCCTGACACCACCCTCAACTTCCCCAATTTGATTCTGTCCTACCCGATTCCGGCGTCATTGTCGGCCACGGATATTCGTGCGGCGGCGTCAGCAGCTGCGGAGGCGAGGCTGGTGAGGTCTGCGGAAACTGGTGGACAAAACGCAGGAGAAGGAGGAGGAGGAGGAGGAAGCCAGGGCGAGGGCTGGAGCCGGACCGGAGAAGTAACGGAGAAAAGCGAAGAATTTATCGATGAGGACGAGCTATTGAATATGCCGAGTTTGCTGGATGACATGGCGAGGGGAATGCAGGTGAGTCCGCCGAGGATAAAGTCCCCGTACCCTTCCGATGATTCACCTACGAATTCAGATCACGGAGATAGCCTCTGGAGTTTTTGA 702 0.5655 MDSKPPPSSLPQQEQSSASSASSPPVLQVPSSHESSSSPRTVRSPGGSLSSGQHTSRRHATFRGIRSRSAKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDTTLNFPNLILSYPIPASLSATDIRAAASAAAEARLVRSAETGGQNAGEGGGGGGSQGEGWSRTGEVTEKSEEFIDEDELLNMPSLLDDMARGMQVSPPRIKSPYPSDDSPTNSDHGDSLWSF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000093g0080 233 MobiDBLite consensus disorder prediction 1 61 - -
Lele2000093g0080 233 Gene3D AP2/ERF domain 61 118 IPR036955 GO:0003700|GO:0006355
Lele2000093g0080 233 SUPERFAMILY DNA-binding domain 62 118 IPR016177 GO:0003677
Lele2000093g0080 233 CDD AP2 62 119 IPR001471 GO:0003700|GO:0006355
Lele2000093g0080 233 MobiDBLite consensus disorder prediction 216 233 - -
Lele2000093g0080 233 SMART rav1_2 61 123 IPR001471 GO:0003700|GO:0006355
Lele2000093g0080 233 ProSiteProfiles AP2/ERF domain profile. 61 117 IPR001471 GO:0003700|GO:0006355
Lele2000093g0080 233 MobiDBLite consensus disorder prediction 150 233 - -
Lele2000093g0080 233 Pfam AP2 domain 62 109 IPR001471 GO:0003700|GO:0006355
Lele2000093g0080 233 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 15 232 IPR045277 GO:0003700
Lele2000093g0080 233 MobiDBLite consensus disorder prediction 1 58 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000093g0080 58 233 AP2-EREBP Transcription Factor Family AT5G52020 57.627 5.47e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele2000093g0080 AP2 2.3e-09 CL0081