Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000093g0076 ATGGATTTTGCTAAGAGCAACAGTGGTTCTGAACCTTCAACTTCTTACAGCTGTTTCAAAGTAGCAAATTTAAGTGAAACGATACTGGACACTAAGCAGTCTGCAAATTTGAAAGATCGTTATGTTCTTGGAGAGCAGTTAGGTTGGGGACAGTTTGGTGTTATCAGGGCGTGCACGGACAAGTTGACTGGAGAGGTTTTAGCCTGTAAATCAATTGCTAAAGATAGATTGGTCACATCAGATGATCTGCGAAGTGTTAATCTTGAGATTGAGATAATGGCTAGGCTATCTGGCCACCCGAATGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAGGATTTTGTACATCTGGTGATGGAGCTTTGTGCTGGAGGTGAACTATTTCACCGTTTAGAGAAGAATGGACGATTTTCTGAATCTGAAGCCCGGGTTCTCTTTAGGCACCTCATGCAGGTCCTTTTGTATTGCCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTAGCAACAAGAGCCTCCTCATCTCCAATTAAATTGGCAGATTTTGGGCTTGCAACTTACATCAAGCCTGGACAAAGCTTGCATGGGTTAGTAGGGAGTCCATTCTATATAGCTCCAGAGGTACTTGCAGGTTCATATAACCAGGCTGCTGATGTTTGGAGTGCAGGTGTCATTCTTTACATTCTACTTAGTGGGATGCCTCCGTTTTGGGGTAAGACCAAGTCACGGATCTTTGAAGCCGTTACGGCTGCTGACTTAAGGTTTCCATCTGAACCTTGGGATCACATTTCTAAATCAGCCAAGGGTTTGATTAAGGGTATGCTCTGCACAGAACATTCTCGAAGGCTCACCGCTCAGCAGGTCTTAGATCATTGCTGGATGGAGAGCAATCAAACACATCCTGAACATCTAATTGAATGTGACATCAAAAGTTGTGGTGAATGGGATGTTGGTGATAGCTCATTCTCTCTGTCCTTTATGCCCAGGAATCAGGACATCAGTTTTGGCGCCGAATCTCCTGCGTGTGATGCTCAGTCACCAACTTTCACATGCAGATCATCATTTTCTTCGTTTCTGGTGGAACCATCGACTCCTTGTTCAGCTTTGGGTGGGTTTTCATTTCAGAGTCCCGGGCATTCTGCTGGTTTGGACATCTCTCCTCCGGTTTCTTCAATGCCTAGCTTTGCATTTTTCAGCGCCAATTCAGTTGTTGAGAAAAGGAGTTGCACACTAGAGTTCTCAACTAATGAATCTGTGAAGACATTTGCTCAAGAATCAAGCTTGGGAAAACTACTTCTATCACCAGATTCTGCTCTTTCTTGTGGACCGCATGTTCAAGCGGGTAATCGCAAGCCAGTGGACACTAAAAGGGCAGGTGCTACCAATGGACATAGGGTTTTAGGAATCCACAGCAAGAGAAACAGAACGATTGGACTTGGCGAAGGTGAGCAAATTGACCTCGTGGTGACGGAATCTGTCATTCGATGGTCATCGTGCACGCAACTCCCGACATCTCTTAGGTCATCTCTTGTATGTTGA 1554 0.4459 MDFAKSNSGSEPSTSYSCFKVANLSETILDTKQSANLKDRYVLGEQLGWGQFGVIRACTDKLTGEVLACKSIAKDRLVTSDDLRSVNLEIEIMARLSGHPNVVDLKAVYEEEDFVHLVMELCAGGELFHRLEKNGRFSESEARVLFRHLMQVLLYCHENGVVHRDLKPENILLATRASSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGSYNQAADVWSAGVILYILLSGMPPFWGKTKSRIFEAVTAADLRFPSEPWDHISKSAKGLIKGMLCTEHSRRLTAQQVLDHCWMESNQTHPEHLIECDIKSCGEWDVGDSSFSLSFMPRNQDISFGAESPACDAQSPTFTCRSSFSSFLVEPSTPCSALGGFSFQSPGHSAGLDISPPVSSMPSFAFFSANSVVEKRSCTLEFSTNESVKTFAQESSLGKLLLSPDSALSCGPHVQAGNRKPVDTKRAGATNGHRVLGIHSKRNRTIGLGEGEQIDLVVTESVIRWSSCTQLPTSLRSSLVC 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000093g0076 517 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000093g0076 517 CDD STKc_CAMK 40 298 - -
Lele2000093g0076 517 FunFam Phosphoenolpyruvate carboxylase kinase 128 315 - -
Lele2000093g0076 517 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000093g0076 517 FunFam Calcium-dependent protein kinase 1 43 126 - -
Lele2000093g0076 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Lele2000093g0076 517 Pfam Protein kinase domain 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele2000093g0076 517 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Lele2000093g0076 517 Gene3D Transferase(Phosphotransferase) domain 1 128 317 - -
Lele2000093g0076 517 SUPERFAMILY Protein kinase-like (PK-like) 38 380 IPR011009 -
Lele2000093g0076 517 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Lele2000093g0076 517 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 306 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000093g0076 24 306 EF-hand Containing Proteins AT3G57530 48.410 1.15e-97 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele2000093g0076 Pkinase 1.9e-71 CL0016