Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000093g0063 ATGAACTCGTTGCATCCATTTGGCGATGAAGATTTGTTCTTCCAGATTTCATTTCTGAATCGTTCTCCTACTCTATCAATCCCAACAATCCCAGAACACGAGATCTTTCATGATCCTGCAGAAGAATTAGTGAAGGATTACGAAAGCTTTCCACCTAATTTTGGAAATACTGATGAATTAATTATACCAAAGGGGAAGGGCAAGCAAAAGCAAAAGGAATTTCCTCCTAAAATTGCTGAAGACTCTAACAAGAAATGGATGCATAGAGAAACAGAAAGACAAAGGAGACAAGAAATGGCCACGCTTTGTGCCTCCCTTAGATCAGCTTTGCCTCTCGAATATATCAGGGGAAAGAGATCGGCGTCAGATCACATTGATGGGGCTGTGAAATATATCAAACAGCTAAAGAACAAGGTGAAGCAATTGAAGGCAAAGAGAGATGAATTGATGAAGAATGAACATGGAATCTCTGTTGTTGTTCATCCTTATAAGGGTGGAGTTGAGATTATGTGCAGTTATAGCTTCAGAGACTACGTTTTTACTCAGTCAACACTATTGAGTATTTTGATTAAACAAGGGCGTAATGTGGTGAGCTGCACTTCTATCAAAAGGGATGAGATGTTCATTCACACAATTCGATTAGAGGAATCTGATATCTCAGAGAAGACTAGTGATTACTCTGAACTGCAAAGAAAGCTTACTGCAACAATATTATCTACAGAACACAGAGAGACTGCATCTGAACCACAAAACTGCTGA 759 0.3913 MNSLHPFGDEDLFFQISFLNRSPTLSIPTIPEHEIFHDPAEELVKDYESFPPNFGNTDELIIPKGKGKQKQKEFPPKIAEDSNKKWMHRETERQRRQEMATLCASLRSALPLEYIRGKRSASDHIDGAVKYIKQLKNKVKQLKAKRDELMKNEHGISVVVHPYKGGVEIMCSYSFRDYVFTQSTLLSILIKQGRNVVSCTSIKRDEMFIHTIRLEESDISEKTSDYSELQRKLTATILSTEHRETASEPQNC 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000093g0063 252 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 83 135 IPR011598 GO:0046983
Lele2000093g0063 252 SMART finulus 89 141 IPR011598 GO:0046983
Lele2000093g0063 252 FunFam Transcription factor bHLH126 76 161 - -
Lele2000093g0063 252 MobiDBLite consensus disorder prediction 58 77 - -
Lele2000093g0063 252 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 82 162 IPR036638 GO:0046983
Lele2000093g0063 252 Coils Coil 125 152 - -
Lele2000093g0063 252 Pfam Helix-loop-helix DNA-binding domain 85 136 IPR011598 GO:0046983
Lele2000093g0063 252 Gene3D - 77 161 IPR036638 GO:0046983
Lele2000093g0063 252 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 75 235 IPR015660 -
Lele2000093g0063 252 CDD bHLH_AtORG2_like 84 151 - -
Lele2000093g0063 252 MobiDBLite consensus disorder prediction 63 77 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000093g0063 84 215 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51790 41.447 3.21e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele2000093g0063 HLH 1.3e-08 No_clan