Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele2000093g0062 ATGGAAAGACAAAGGAGGCAAGAAATGGCCGATCTTTCTGCTTCTCTTAGATCCTTACTCCCTCTAGAGTACATCAAGGGGAAGCGATCGGTATCAGATCATTTGAATGAGGCTGCCAAATACATCAAACATCTACAAAATAGGATCCAGGAACTGAGTGGTAAGAGGAACATACTAAGGATGATGTGCAATAATTTGAGTGTTGATGACCCTGAGATTACAACCTTAATCAAAGCTACCACAACTCATGACTCGCCAACAAATGTTATTACTGTTACTCGAACTTTGGCTGGGATTGAGGTTGCTCTCAGCACCTTAAAACTGTTGCCTCTTGCAAAACTACTGGATTTACTATTCAAAGAGGGGTTAAATGTTGTTCATTGTGTTCATACAAAAATAGAAGCAATGCAGATCTATACCATCCACACTGAGGCAAGTGTACGTGATGATGAGAAGAAGATCGTTCGTAGGGAAACTGAAAGGAAAAGAAGGCAGCAAATGACCACCCTTTGTGAATCACTCCGATCTTTGCTACCTTTTGAGCTCATCAAGGGAAAGCGTTCAGTGTCTGATCAAATAGGCGAGGCTGCATGTTATATCAAAGATTTGCAGGAGAAAACCCAAGAACTCCAAATCAAGAGAGATAAGCTCAAACAAAAGGCTAATCCAAGTTTTCTTGGTGCTGGAATAGATGAAAGTTTTTCAAGCCATTTAAATATGGTTAAGTGTGTGAGCATTTCGCCTTTTCCAGGTGGCCTGGAAATTTCTGTAGACAGTGGCTTGGAGGAAAGCAGCTTTCCACTATCAATCTTGTTGGAAATATTGATGCAAGAAGGATGTAATGTTGTGAGCTGTGTGTCCACCCAAGTGAATGGGAGGCTATACCACTCTATGAAGTCTGAGGTATACTAA 912 0.4112 MERQRRQEMADLSASLRSLLPLEYIKGKRSVSDHLNEAAKYIKHLQNRIQELSGKRNILRMMCNNLSVDDPEITTLIKATTTHDSPTNVITVTRTLAGIEVALSTLKLLPLAKLLDLLFKEGLNVVHCVHTKIEAMQIYTIHTEASVRDDEKKIVRRETERKRRQQMTTLCESLRSLLPFELIKGKRSVSDQIGEAACYIKDLQEKTQELQIKRDKLKQKANPSFLGAGIDESFSSHLNMVKCVSISPFPGGLEISVDSGLEESSFPLSILLEILMQEGCNVVSCVSTQVNGRLYHSMKSEVY 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele2000093g0062 303 CDD bHLH_AtORG2_like 2 60 - -
Lele2000093g0062 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 150 223 IPR036638 GO:0046983
Lele2000093g0062 303 Pfam Helix-loop-helix DNA-binding domain 153 204 IPR011598 GO:0046983
Lele2000093g0062 303 Pfam Helix-loop-helix DNA-binding domain 1 46 IPR011598 GO:0046983
Lele2000093g0062 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 65 IPR036638 GO:0046983
Lele2000093g0062 303 Gene3D - 141 224 IPR036638 GO:0046983
Lele2000093g0062 303 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 150 301 IPR015660 -
Lele2000093g0062 303 Gene3D - 1 73 IPR036638 GO:0046983
Lele2000093g0062 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 45 IPR011598 GO:0046983
Lele2000093g0062 303 Coils Coil 35 62 - -
Lele2000093g0062 303 CDD bHLH_AtORG2_like 152 219 - -
Lele2000093g0062 303 Coils Coil 200 220 - -
Lele2000093g0062 303 SMART finulus 1 51 IPR011598 GO:0046983
Lele2000093g0062 303 SMART finulus 157 209 IPR011598 GO:0046983
Lele2000093g0062 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 151 203 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele2000093g0062 151 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51790 40.385 4.82e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele2000093g0062 HLH 6.9e-07 No_clan